非血红素单核铁酶的表达、纯化、动力学和结晶:联苯、邻苯二甲酸盐和对苯二甲酸盐二氧酶。

4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Methods in enzymology Pub Date : 2024-01-01 Epub Date: 2024-06-08 DOI:10.1016/bs.mie.2024.05.014
Jai Krishna Mahto, Arpan Kayastha, Pravindra Kumar
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引用次数: 0

摘要

非血红素铁氧合酶是一个用途广泛的酶家族,对于将分子氧结合到各种生物大分子中至关重要。尽管这些酶非常重要,但只有数量有限的酶在结构和功能上得到了表征。令人惊讶的是,在了解这些酶如何利用典型结构和反应机制催化各种反应方面仍然存在巨大差距。增进我们对这些催化剂的了解,有望推动基础酶学和实际应用的发展。本章旨在概述联苯二氧酶、邻苯二甲酸酯二氧酶和对苯二甲酸酯二氧酶的异源表达、酶制剂、体外酶测定和结晶方法。这些酶催化联苯、邻苯二甲酸酯和对苯二甲酸酯分子的二羟基化,可作为其他非血红素铁氧合酶的功能和结构分析模型。
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Expression, purification, kinetics, and crystallization of non-heme mononuclear iron enzymes: Biphenyl, Phthalate, and Terephthalate dioxygenases.

Non-heme iron oxygenases constitute a versatile enzyme family that is crucial for incorporating molecular oxygen into diverse biomolecules. Despite their importance, only a limited number of these enzymes have been structurally and functionally characterized. Surprisingly, there remains a significant gap in understanding how these enzymes utilize a typical architecture and reaction mechanism to catalyze a wide range of reactions. Improving our understanding of these catalysts holds promise for advancing both fundamental enzymology and practical applications. This chapter aims to outline methods for heterologous expression, enzyme preparation, in vitro enzyme assays, and crystallization of biphenyl dioxygenase, phthalate dioxygenase and terephthalate dioxygenase. These enzymes catalyze the dihydroxylation of biphenyl, phthalate and terephthalate molecules, serving as a model for functional and structural analysis of other non-heme iron oxygenases.

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来源期刊
Methods in enzymology
Methods in enzymology 生物-生化研究方法
CiteScore
2.90
自引率
0.00%
发文量
308
审稿时长
3-6 weeks
期刊介绍: The critically acclaimed laboratory standard for almost 50 years, Methods in Enzymology is one of the most highly respected publications in the field of biochemistry. Each volume is eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. Now with over 500 volumes the series contains much material still relevant today and is truly an essential publication for researchers in all fields of life sciences, including microbiology, biochemistry, cancer research and genetics-just to name a few. Five of the 2013 Nobel Laureates have edited or contributed to volumes of MIE.
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