离子通道进化的病毒指纹:复杂性与功能的折衷。

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular Structure & Dynamics Pub Date : 2024-10-04 DOI:10.1080/07391102.2024.2411523
Marta V Volovik, Oleg V Batishchev
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引用次数: 0

摘要

从细胞前超分子组合到细胞世界的演变,源于在细胞内部和外部环境之间建立屏障的能力。这一步源于形成膜的可能性,它就像城堡的墙壁一样保护着细胞。然而,每座城堡都需要大门来进行交易,也就是说,在细胞中,需要有控制地进行物质交换。这些 "门 "应该有开关机制、守卫、进入规则等。众所周知,不同的结构可以使膜对从离子到大分子等各种物质具有渗透性。它们是两性肽、肽的集合体、具有许多跨膜结构域的复杂膜通道等。在进化过程中,细胞世界保留并选择了许多变体,最终为原核生物和真核生物提供了具有高度选择性和调节性的离子通道。然而,在病毒中也发现了各种更简单的离子通道变体。尽管病毒的起源仍有争议,但它们与细胞生命形式的进化是平行的。作为包膜生物的最初形式、原细胞或其逸散部分的还原,病毒可能是离子通道等细胞结构进化步骤的指纹。因此,病毒多孔菌素可以为我们提供必要的信息,让我们了解在支持膜渗透性受控的所有要求时,如何在高功能性和不太复杂的结构之间进行选择。在这篇综述中,我们试图阐明这些折衷方案,并以病毒为例,说明离子通道从多肽到复杂的多亚基结构的可能进化途径。
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Viral fingerprints of the ion channel evolution: compromise of complexity and function.

Evolution from precellular supramolecular assemblies to cellular world originated from the ability to make a barrier between the interior of the cell and the outer environment. This step resulted from the possibility to form a membrane, which preserves the cell like a wall of the castle. However, every castle needs gates for trading, i.e. in the case of cell, for controlled exchange of substances. These 'gates' should have the mechanism of opening and closing, guards, entry rules, and so on. Different structures are known to be able to make membrane permeable to various substances, from ions to macromolecules. They are amphipathic peptides, their assemblies, sophisticated membrane channels with numerous transmembrane domains, etc. Upon evolving, cellular world preserved and selected many variants, which, finally, have provided both prokaryotes and eukaryotes with highly selective and regulated ion channels. However, various simpler variants of ion channels are found in viruses. Despite the origin of viruses is still under debates, they have evolved parallelly with the cellular forms of life. Being initial form of the enveloped organisms, reduction of protocells or their escaped parts, viruses might be fingerprints of the evolutionary steps of cellular structures like ion channels. Therefore, viroporins may provide us a necessary information about selection between high functionality and less complex structure in supporting all the requirements for controlled membrane permeability. In this review we tried to elucidate these compromises and show the possible way of the evolution of ion channels, from peptides to complex multi-subunit structures, basing on viral examples.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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