通过细胞内水凝胶化改造半机械病原体

IF 3.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS ACS Synthetic Biology Pub Date : 2024-11-15 Epub Date: 2024-10-16 DOI:10.1021/acssynbio.4c00420
Shahid Khan, Pin-Ru Lin, Cheemeng Tan
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引用次数: 0

摘要

合成生物学主要关注两种细胞底盘:活细胞和非生命系统。活细胞是具有活跃新陈代谢的自动复制系统。非生命系统,包括人造细胞和纳米粒子,是通常缺乏主动新陈代谢的非复制系统。在最近的工作中,我们通过细胞内水凝胶技术,设计出了非复制但新陈代谢活跃的半机械细菌。细胞内水凝胶化是通过向细胞内注入凝胶单体和光激活剂,然后激活细胞内凝胶单体的聚合作用来实现的。不过,之前的工作只研究了大肠杆菌细胞。将 Cyborg-Cell 方法扩展到致病细菌,可以在生物医学应用中利用它们的致病特性。在此,我们重点研究了铜绿假单胞菌、金黄色葡萄球菌和肺炎克雷伯菌的不同菌株。为了合成 Cyborg 病原体,我们首先揭示了不同水凝胶浓度对 Cyborg 病原体新陈代谢、复制和细胞内凝胶化的影响。接着,我们通过共聚焦显微镜和实时 PCR 证明,巨噬细胞对 Cyborg 病原体的吸收程度与野生型病原体相似。最后,我们证明了巨噬细胞吸收 Cyborg 病原体后会表现出与野生型病原体相似的表型反应。我们的工作将细胞内水凝胶化方法从大肠杆菌实验室菌株推广到细菌病原体。新的半机械病原体可应用于从药物输送到免疫疗法的生物医学领域。
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Engineering Cyborg Pathogens through Intracellular Hydrogelation.

Synthetic biology primarily focuses on two kinds of cell chassis: living cells and nonliving systems. Living cells are autoreplicating systems that have active metabolism. Nonliving systems, including artificial cells and nanoparticles, are nonreplicating systems typically lacking active metabolism. In recent work, Cyborg bacteria that are nonreplicating-but-metabolically active have been engineered through intracellular hydrogelation. Intracellular hydrogelation is conducted by infusing gel monomers and photoactivators into cells, followed by the activation of polymerization of the gel monomers inside the cells. However, the previous work investigated only Escherichia coli cells. Extending the Cyborg-Cell method to pathogenic bacteria could enable the exploitation of their pathogenic properties in biomedical applications. Here, we focus on different strains of Pseudomonas aeruginosa, Staphylococcus aureus, and Klebsiella pneumoniae. To synthesize the Cyborg pathogens, we first reveal the impact of different hydrogel concentrations on the metabolism, replication, and intracellular gelation of Cyborg pathogens. Next, we demonstrate that the Cyborg pathogens are taken up by macrophages in a similar magnitude as wild-type pathogens through confocal microscopy and real-time PCR. Finally, we show that the macrophage that takes up the Cyborg pathogen exhibits a similar phenotypic response to the wild-type pathogen. Our work generalizes the intracellular hydrogelation approach from lab strains of E. coli to bacterial pathogens. The new Cyborg pathogens could be applied in biomedical applications ranging from drug delivery to immunotherapy.

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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
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