粘质沙雷氏菌全国暴发:调查揭示了基因组种群结构,但没有来源,挪威,2021年6月至2023年2月。

IF 7.8 2区 医学 Q1 INFECTIOUS DISEASES Eurosurveillance Pub Date : 2025-02-01 DOI:10.2807/1560-7917.ES.2025.30.5.2400291
Arne Michael Taxt, Vegard Eldholm, Nicola Isabelle Kols, Maria Schei Haugan, Niclas Raffelsberger, Anne Mette Asfeldt, André Ingebretsen, Anita Blomfeldt, Kristin Stenhaug Kilhus, Paul Christoffer Lindemann, Horst Bentele, Jeanette Stålcrantz, Liz Ertzeid Ødeskaug, Thale Cathrine Berg
{"title":"粘质沙雷氏菌全国暴发:调查揭示了基因组种群结构,但没有来源,挪威,2021年6月至2023年2月。","authors":"Arne Michael Taxt, Vegard Eldholm, Nicola Isabelle Kols, Maria Schei Haugan, Niclas Raffelsberger, Anne Mette Asfeldt, André Ingebretsen, Anita Blomfeldt, Kristin Stenhaug Kilhus, Paul Christoffer Lindemann, Horst Bentele, Jeanette Stålcrantz, Liz Ertzeid Ødeskaug, Thale Cathrine Berg","doi":"10.2807/1560-7917.ES.2025.30.5.2400291","DOIUrl":null,"url":null,"abstract":"<p><p>We report a national outbreak of <i>Serratia marcescens</i> complex type 755 (ct755) in Norway, with 74 cases identified between June 2021 and February 2023. Careful reviews of patient journals and interviews were performed, involving 33 hospitals throughout Norway. All available clinical isolates of <i>S. marcescens</i> collected between January 2021 and February 2023 (n = 455, including cases) from all involved hospitals were whole genome sequenced. Cases displayed a pattern of opportunistic infections, as usually observed with <i>S. marcescens</i>. No epidemiological links, common exposures or common risk factors were identified. The investigation pointed to an outbreak source present in the community. We suspect a nationally distributed product, possibly a food product, as the source. Phylogenetic analysis revealed a highly diverse bacterial population containing multiple distinct clusters. The outbreak cluster ct755 stands out as the largest and least diverse clone of a continuum, however a second cluster (ct281) also triggered a separate outbreak investigation. This report highlights challenges in the investigation of outbreaks caused by opportunistic pathogens and suggests that the presence of identical strains of <i>S. marcescens</i> in clinical samples is more common than previously recognised.</p>","PeriodicalId":12161,"journal":{"name":"Eurosurveillance","volume":"30 5","pages":""},"PeriodicalIF":7.8000,"publicationDate":"2025-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11803742/pdf/","citationCount":"0","resultStr":"{\"title\":\"A national outbreak of <i>Serratia marcescens</i> complex: investigation reveals genomic population structure but no source, Norway, June 2021 to February 2023.\",\"authors\":\"Arne Michael Taxt, Vegard Eldholm, Nicola Isabelle Kols, Maria Schei Haugan, Niclas Raffelsberger, Anne Mette Asfeldt, André Ingebretsen, Anita Blomfeldt, Kristin Stenhaug Kilhus, Paul Christoffer Lindemann, Horst Bentele, Jeanette Stålcrantz, Liz Ertzeid Ødeskaug, Thale Cathrine Berg\",\"doi\":\"10.2807/1560-7917.ES.2025.30.5.2400291\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>We report a national outbreak of <i>Serratia marcescens</i> complex type 755 (ct755) in Norway, with 74 cases identified between June 2021 and February 2023. Careful reviews of patient journals and interviews were performed, involving 33 hospitals throughout Norway. All available clinical isolates of <i>S. marcescens</i> collected between January 2021 and February 2023 (n = 455, including cases) from all involved hospitals were whole genome sequenced. Cases displayed a pattern of opportunistic infections, as usually observed with <i>S. marcescens</i>. No epidemiological links, common exposures or common risk factors were identified. The investigation pointed to an outbreak source present in the community. We suspect a nationally distributed product, possibly a food product, as the source. Phylogenetic analysis revealed a highly diverse bacterial population containing multiple distinct clusters. The outbreak cluster ct755 stands out as the largest and least diverse clone of a continuum, however a second cluster (ct281) also triggered a separate outbreak investigation. This report highlights challenges in the investigation of outbreaks caused by opportunistic pathogens and suggests that the presence of identical strains of <i>S. marcescens</i> in clinical samples is more common than previously recognised.</p>\",\"PeriodicalId\":12161,\"journal\":{\"name\":\"Eurosurveillance\",\"volume\":\"30 5\",\"pages\":\"\"},\"PeriodicalIF\":7.8000,\"publicationDate\":\"2025-02-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11803742/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Eurosurveillance\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.2807/1560-7917.ES.2025.30.5.2400291\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"INFECTIOUS DISEASES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Eurosurveillance","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.2807/1560-7917.ES.2025.30.5.2400291","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0

摘要

我们报告了挪威755型粘质沙雷氏菌(ct755)的全国性暴发,在2021年6月至2023年2月期间发现了74例病例。对患者日记和访谈进行了仔细审查,涉及挪威各地的33家医院。对2021年1月至2023年2月期间从所有相关医院收集的所有可获得的粘质葡萄球菌临床分离株(n = 455,包括病例)进行全基因组测序。病例显示机会性感染的模式,通常与粘质葡萄球菌观察。没有发现流行病学联系、共同暴露或共同危险因素。调查指出,疫情源存在于社区中。我们怀疑是一种全国分销的产品,可能是一种食品。系统发育分析显示一个高度多样化的细菌群体包含多个不同的集群。爆发集群ct755是连续体中最大和最不多样化的克隆,但第二个集群(ct281)也引发了单独的爆发调查。该报告强调了在调查由机会致病菌引起的疫情方面面临的挑战,并表明在临床样本中存在相同的粘质葡萄球菌菌株比以前认识到的更为常见。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

摘要图片

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
A national outbreak of Serratia marcescens complex: investigation reveals genomic population structure but no source, Norway, June 2021 to February 2023.

We report a national outbreak of Serratia marcescens complex type 755 (ct755) in Norway, with 74 cases identified between June 2021 and February 2023. Careful reviews of patient journals and interviews were performed, involving 33 hospitals throughout Norway. All available clinical isolates of S. marcescens collected between January 2021 and February 2023 (n = 455, including cases) from all involved hospitals were whole genome sequenced. Cases displayed a pattern of opportunistic infections, as usually observed with S. marcescens. No epidemiological links, common exposures or common risk factors were identified. The investigation pointed to an outbreak source present in the community. We suspect a nationally distributed product, possibly a food product, as the source. Phylogenetic analysis revealed a highly diverse bacterial population containing multiple distinct clusters. The outbreak cluster ct755 stands out as the largest and least diverse clone of a continuum, however a second cluster (ct281) also triggered a separate outbreak investigation. This report highlights challenges in the investigation of outbreaks caused by opportunistic pathogens and suggests that the presence of identical strains of S. marcescens in clinical samples is more common than previously recognised.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Eurosurveillance
Eurosurveillance INFECTIOUS DISEASES-
CiteScore
32.70
自引率
2.10%
发文量
430
审稿时长
3-8 weeks
期刊介绍: Eurosurveillance is a European peer-reviewed journal focusing on the epidemiology, surveillance, prevention, and control of communicable diseases relevant to Europe.It is a weekly online journal, with 50 issues per year published on Thursdays. The journal includes short rapid communications, in-depth research articles, surveillance reports, reviews, and perspective papers. It excels in timely publication of authoritative papers on ongoing outbreaks or other public health events. Under special circumstances when current events need to be urgently communicated to readers for rapid public health action, e-alerts can be released outside of the regular publishing schedule. Additionally, topical compilations and special issues may be provided in PDF format.
期刊最新文献
Two-season effectiveness of a single nirsevimab dose against RSV hospitalisation in healthy term-born infants: a population-based case-control study, Spain, October 2023 to March 2025. Burkholderia stabilis infections associated with contamination of non-sterile alcohol-free skin cleansing wipes, United Kingdom, 2018 to 2026. The role of contaminated eggshells used in poultry feed in a diffuse nationwide outbreak of Salmonella Enteritidis, the Netherlands, 2023 to 2025. Cross-sectional seroprevalence study of measles antibodies among children to identify gaps in population immunity, Ireland, 2024. A multidisciplinary approach to the detection of and response to West Nile virus in the Netherlands between 2020 and 2023: best practices, challenges and opportunities.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1