从天然矿泉水中分离出的两新种:格氏假单胞菌和乳杆菌假单胞菌。

S Verhille, N Baïda, F Dabboussi, M Hamze, D Izard, H Leclerc
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引用次数: 74

摘要

从天然矿泉水中分离的25株未鉴定的荧光假单胞菌菌株先前聚集为3个表型亚群,XIIIb, XVa和XVc。这些菌株在本研究中具有基因典型特征。DNA-DNA杂交结果和DNA碱基组成分析表明,这些菌株是两个新种的成员,并建议将其命名为gessardii Pseudomonas sp. nov.(型菌株CIP 105469T)和migulae Pseudomonas sp. nov.(型菌株CIP 105470T)。gessardii包括来自XVa和XVc表型亚群的13株。麦拉假单胞菌包括表型亚群XIIIb的10株。格氏假单胞菌的DNA-DNA亲缘度为71 ~ 100%,而乳牛假单胞菌的DNA-DNA亲缘度为74 ~ 100%。各类型菌株DNA中G + C含量为58 mol%。67株假单胞菌的DNA相似度低于55%,δ Tm值为13℃或更高。这两个新种具有所有假单胞菌所共有的基本形态特征。P. migulae菌株吸收l -阿拉伯糖糖、d -木糖糖、d -木糖糖、d -糖精、中酒石酸盐、三羧酸盐、d -葡萄糖酸盐、d -半乳糖酸盐、苯乙酸盐和组胺作为碳源,而P. gessardii菌株吸收l -阿拉伯糖糖、肌肌醇、adonitol、木糖醇和中赤藓糖醇作为碳源。测定各型菌株的16S rRNA全序列,并与假单胞菌种型菌株进行比较。最后,根据序列分析推断出两个新种属于“荧光假单胞菌属内簇”。迄今为止,它们的临床意义尚不清楚。
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Pseudomonas gessardii sp. nov. and Pseudomonas migulae sp. nov., two new species isolated from natural mineral waters.

Twenty-five non-identified fluorescent Pseudomonas strains isolated from natural mineral waters were previously clustered into three phenotypic subclusters, XIIIb, XVa and XVc. These strains were characterized genotypically in the present study. DNA-DNA hybridization results and DNA base composition analysis revealed that these strains were members of two new species, for which the names Pseudomonas gessardii sp. nov. (type strain CIP 105469T) and Pseudomonas migulae sp. nov. (type strain CIP 105470T) are proposed. P. gessardii included 13 strains from phenotypic subclusters XVa and XVc. P. migulae included 10 strains from phenotypic subcluster XIIIb. The levels of DNA-DNA relatedness ranged from 71 to 100% for P. gessardii and from 74 to 100% for P. migulae. The G + C content of the DNA of each type strain was 58 mol%. DNA similarity levels, measured with 67 reference strains of Pseudomonas species, were below 55%, with delta Tm values of 13 degrees C or more. The two new species presented basic morphological characteristics common to all pseudomonads. Various phenotypic features were found to differentiate them: P. gessardii strains utilized L-arabitol, myo-inositol, adonitol, xylitol and meso-erythritol as carbon sources, whereas P. migulae strains assimilated L-arabinose, D-xylose, D-saccharate, meso-tartrate, tricarballylate, D-glucuronate, D-galacturonate, phenylacetate and histamine. The complete 16S rRNA sequences of each type strain were determined and compared with those of the type strains of Pseudomonas species. Finally, a phylogenetic tree was inferred from sequence analysis and demonstrated that the two new species fell into the 'Pseudomonas fluorescens intrageneric cluster'. To date, their clinical significance is unknown.

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