污水处理厂分离丝状硫菌(Thiothrix spp.和Eikelboom型021N细菌)的系统发育关系及eikelboomi Thiothrix sp. nov.、unzii Thiothrix sp. nov.、fructosivorans sp. nov.和defluvii Thiothrix sp11 .的描述。

R Howarth, R F Unz, E M Seviour, R J Seviour, L L Blackall, R W Pickup, J G Jones, J Yaguchi, I M Head
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引用次数: 98

摘要

混合营养型和自养型硫thrix物种与形态相似的化学有机营养细菌(如Leucothrix物种,Eikelboom型021N细菌)的关系多年来一直是一个争论的问题。这些细菌可以根据共同的形态特征分组在一起,也可以根据它们的营养成分分开。这些细菌中的许多难以在无菌培养中维持,直到最近,很少有分离物可用于全面的表型和基因型表征。采用16S rRNA序列比较分析方法对不同分离株硫thrix spp.和Eikelboom型021N菌株进行了鉴定。结果表明,硫喉虫属与Eikelboom型021N分离株形成一个单系群。此外,从不同大陆分离的ekelboom型021N细菌的分离株在系统发育上密切相关。基于16S rRNA序列的系统发育与Thiothrix和Eikelboom型021N的形态相似性一致。然而,本研究中检测到的一个分离株(Ben47)与thiiothrix spp.和Eikelboom型021N分离株具有许多形态特征,但在系统发育上与它们并不密切相关。因此,仅凭形态学不能将细菌划分为Thiothrix/ 021N型。比较16S rRNA序列分析支持Thiothrix/ 021N型细菌群的单系性,并且Thiothrix spp.和Eikelboom 021N型细菌之间的表型差异目前还不明确。例如,这两类生物都包括在细胞内沉积单质硫的异养生物。因此,我们建议Eikelboom型021N细菌应作为一个新种纳入硫毒杆菌属(thiiothrix eikelboomii sp. nov.),并进一步描述了三个新的硫毒杆菌种:硫毒杆菌unzii sp. nov.、硫毒杆菌fructosivorans sp. nov.和硫毒杆菌defluvii sp. nov.)。
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Phylogenetic relationships of filamentous sulfur bacteria (Thiothrix spp. and Eikelboom type 021N bacteria) isolated from wastewater-treatment plants and description of Thiothrix eikelboomii sp. nov., Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. nov. and Thiothrix defluvii sp. nov.

The relationship of mixotrophic and autotrophic Thiothrix species to morphologically similar chemoorganotrophic bacteria (e.g. Leucothrix species, Eikelboom type 021N bacteria) has been a matter of debate for some years. These bacteria have alternatively been grouped together on the basis of shared morphological features or separated on the basis of their nutrition. Many of these bacteria are difficult to maintain in axenic culture and, until recently, few isolates were available to allow comprehensive phenotypic and genotypic characterization. Several isolates of Thiothrix spp. and Eikelboom type 021N strains were characterized by comparative 16S rRNA sequence analysis. This revealed that the Thiothrix spp. and Eikelboom type 021N isolates formed a monophyletic group. Furthermore, isolates of Eikelboom type 021N bacteria isolated independently from different continents were phylogenetically closely related. The 16S rRNA sequence-based phylogeny was congruent with the morphological similarities between Thiothrix and Eikelboom type 021N. However, one isolate examined in this study (Ben47) shared many morphological features with the Thiothrix spp. and Eikelboom type 021N isolates, but was not closely related to them phylogenetically. Consequently, morphology alone cannot be used to assign bacteria to the Thiothrix/type 021N group. Comparative 16S rRNA sequence analysis supports monophyly of the Thiothrix/type 021N group, and phenotypic differences between the Thiothrix spp. and Eikelboom type 021N bacteria are currently poorly defined. For example, both groups include heterotrophic organisms that deposit intracellular elemental sulfur. It is therefore proposed that the Eikelboom type 021N bacteria should be accommodated within the genus Thiothrix as a new species, Thiothrix eikelboomii sp. nov., and three further new Thiothrix species are described: Thiothrix unzii sp. nov., Thiothrix fructosivorans sp. nov. and Thiothrix defluvii sp. nov.

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