用格结构从有限序列中提取不频繁的简单基元。

Tarek El-Falah, Thierry Lecroq, Mourad Elloumi
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引用次数: 1

摘要

本文给出了一种在有限序列集合中寻找不频繁简单基元的方法。该方法使用晶格结构和最小的禁止模式。它基于一种解决简单基序问题的方法,具有在生物大分子中发现新专利的潜力。事实上,提取的基序可以帮助生物学家了解这些大分子的生物学功能,从而可以帮助他们理解这些序列所涉及的生物过程的机制。
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Extraction of infrequent simple motifs from a finite set of sequences using a lattice structure.

In this paper we present a method for finding infrequent simple motifs in a finite set of sequences. The method uses a lattice structure and minimal forbidden patterns. It is based on a method for solving the Simple Motif Problem and has the potential to discover new patents in biological macromolecules. Indeed, the extracted motifs can help biologists to learn about the biological functions of these macromolecules and, consequently, can help them to understand the mechanisms of the biological processes in which these sequences are involved.

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