Cristobal Vergara-Niedermayr, Fusheng Wang, Tony Pan, Tahsin Kurc, Joel Saltz
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引用次数: 0
摘要
在医疗保健、生命科学和许多其他领域，XML 被广泛用作基于网络应用的信息交换平台。不断增加的 XML 数据现在通过最新的本地 XML 数据库技术进行管理。符合通用 XML 模式的 XML 数据源可通过语法互操作性进行共享和整合。通过使用与本体概念相关联的通用数据元素对数据模型进行语义注释，可以实现语义互操作性。在本文中，我们介绍了一个框架和软件系统，用于支持开发可通过网格基础设施共享的基于 XML 的语义互操作数据源。我们还介绍了通过 XML 模式的语义注释、XML 数据的语义验证和语义编写来支持语义验证 XML 数据的工作。我们演示了该系统在医疗图像注释和标记的生物医学数据库中的应用。
XML is ubiquitously used as an information exchange platform for web-based applications in healthcare, life sciences, and many other domains. Proliferating XML data are now managed through latest native XML database technologies. XML data sources conforming to common XML schemas could be shared and integrated with syntactic interoperability. Semantic interoperability can be achieved through semantic annotations of data models using common data elements linked to concepts from ontologies. In this paper, we present a framework and software system to support the development of semantic interoperable XML based data sources that can be shared through a Grid infrastructure. We also present our work on supporting semantic validated XML data through semantic annotations for XML Schema, semantic validation and semantic authoring of XML data. We demonstrate the use of the system for a biomedical database of medical image annotations and markups.
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