Kurt C Showmaker, Mark A Arick, Chuan-Yu Hsu, Brigitte E Martin, Xiaoqiang Wang, Jiayuan Jia, Martin J Wubben, Robert L Nichols, Tom W Allen, Daniel G Peterson, Shi-En Lu
{"title":"棉花白叶枯病菌柑橘黄单胞菌的基因组分析。乳突菌MSCT1。","authors":"Kurt C Showmaker, Mark A Arick, Chuan-Yu Hsu, Brigitte E Martin, Xiaoqiang Wang, Jiayuan Jia, Martin J Wubben, Robert L Nichols, Tom W Allen, Daniel G Peterson, Shi-En Lu","doi":"10.1186/s40793-017-0253-3","DOIUrl":null,"url":null,"abstract":"<p><p><i>Xanthomonas citri</i> pv. <i>malvacearum</i> is a major pathogen of cotton, <i>Gossypium hirsutum</i> L.. In this study we report the complete genome of the <i>X. citri</i> pv. <i>malvacearum</i> strain MSCT1 assembled from long read DNA sequencing technology. The MSCT1 genome is the first <i>X. citri</i> pv. <i>malvacearum</i> genome with complete coding regions for <i>X. citri</i> pv. <i>malvacearum</i> transcriptional activator-like effectors. In addition functional and structural annotations are presented in this study that will provide a foundation for future pathogenesis studies with MSCT1.</p>","PeriodicalId":21965,"journal":{"name":"Standards in Genomic Sciences","volume":"12 ","pages":"42"},"PeriodicalIF":0.0000,"publicationDate":"2017-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s40793-017-0253-3","citationCount":"6","resultStr":"{\"title\":\"The genome of the cotton bacterial blight pathogen <i>Xanthomonas citri</i> pv. <i>malvacearum</i> strain MSCT1.\",\"authors\":\"Kurt C Showmaker, Mark A Arick, Chuan-Yu Hsu, Brigitte E Martin, Xiaoqiang Wang, Jiayuan Jia, Martin J Wubben, Robert L Nichols, Tom W Allen, Daniel G Peterson, Shi-En Lu\",\"doi\":\"10.1186/s40793-017-0253-3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Xanthomonas citri</i> pv. <i>malvacearum</i> is a major pathogen of cotton, <i>Gossypium hirsutum</i> L.. In this study we report the complete genome of the <i>X. citri</i> pv. <i>malvacearum</i> strain MSCT1 assembled from long read DNA sequencing technology. The MSCT1 genome is the first <i>X. citri</i> pv. <i>malvacearum</i> genome with complete coding regions for <i>X. citri</i> pv. <i>malvacearum</i> transcriptional activator-like effectors. In addition functional and structural annotations are presented in this study that will provide a foundation for future pathogenesis studies with MSCT1.</p>\",\"PeriodicalId\":21965,\"journal\":{\"name\":\"Standards in Genomic Sciences\",\"volume\":\"12 \",\"pages\":\"42\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2017-07-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1186/s40793-017-0253-3\",\"citationCount\":\"6\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Standards in Genomic Sciences\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1186/s40793-017-0253-3\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2017/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q3\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Standards in Genomic Sciences","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1186/s40793-017-0253-3","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2017/1/1 0:00:00","PubModel":"eCollection","JCR":"Q3","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1.
Xanthomonas citri pv. malvacearum is a major pathogen of cotton, Gossypium hirsutum L.. In this study we report the complete genome of the X. citri pv. malvacearum strain MSCT1 assembled from long read DNA sequencing technology. The MSCT1 genome is the first X. citri pv. malvacearum genome with complete coding regions for X. citri pv. malvacearum transcriptional activator-like effectors. In addition functional and structural annotations are presented in this study that will provide a foundation for future pathogenesis studies with MSCT1.