索诺兰沙漠锰矿中抗紫外线节肢细菌MN05-02的全基因组序列

Journal of Genomics Pub Date : 2019-02-08 eCollection Date: 2019-01-01 DOI:10.7150/jgen.32194
Konosuke Mark Ii, Nobuaki Kono, Ivan Glaucio Paulino-Lima, Masaru Tomita, Lynn Justine Rothschild, Kazuharu Arakawa
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引用次数: 2

摘要

节肢细菌sp.菌株MN05-02是一种从美国亚利桑那州索诺兰沙漠锰矿中分离出来的抗紫外线细菌。该菌株的LD10为123 Jm-2,是大肠埃希氏菌的2倍,可作为比较研究其抗紫外线能力和锰对其表型作用的有用资源。其完整基因组由一条3488433 bp的染色体和一个154991 bp的质粒组成。染色体包含3430个推测基因,包括3366个蛋白质编码基因,52个tRNA和12个rRNA基因。基因组编码的类胡萝卜素生物合成操纵子结构反映了这种细菌产生的橘红色色素的特征,这可能部分有助于其抗紫外线。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Complete Genome Sequence of Arthrobacter sp. Strain MN05-02, a UV-Resistant Bacterium from a Manganese Deposit in the Sonoran Desert.

Arthrobacter sp. strain MN05-02 is a UV-resistant bacterium isolated from a manganese deposit in the Sonoran Desert, Arizona, USA. The LD10 of this strain is 123 Jm-2, which is twice that of Escherichia coli, and therefore can be a useful resource for comparative study of UV resistance and the role of manganese on this phenotype. Its complete genome is comprised of a chromosome of 3,488,433 bp and a plasmid of 154,991 bp. The chromosome contains 3,430 putative genes, including 3,366 protein coding genes, 52 tRNA and 12 rRNA genes. Carotenoid biosynthesis operon structure coded within the genome mirrors the characteristic orange-red pigment this bacterium produces, which presumably partly contribute to its UV resistance.

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来源期刊
自引率
0.00%
发文量
11
审稿时长
12 weeks
期刊介绍: Journal of Genomics publishes papers of high quality in all areas of gene, genetics, genomics, proteomics, metabolomics, DNA/RNA, computational biology, bioinformatics, and other relevant areas of research and application. Articles published by the journal are rigorously peer-reviewed. Types of articles include: Research paper, Short research communication, Review or mini-reviews, Commentary, Database, Software.
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