Shu-Fu Shih, Sevgi Gokce Kafali, Tess Armstrong, Xiaodong Zhong, Kara L Calkins, Holden H Wu
{"title":"基于深度学习的参数映射与不确定性估计,用于加速自由呼吸径向MRI脂肪量化。","authors":"Shu-Fu Shih, Sevgi Gokce Kafali, Tess Armstrong, Xiaodong Zhong, Kara L Calkins, Holden H Wu","doi":"10.1109/isbi48211.2021.9433938","DOIUrl":null,"url":null,"abstract":"<p><p>Deep learning has been applied to remove artifacts from undersampled MRI and to replace time-consuming signal fitting in quantitative MRI, but these have usually been treated as separate tasks, which does not fully exploit the shared information. This work proposes a new two-stage framework that completes these two tasks in a concerted approach and also estimates the pixel-wise uncertainty levels. Results from accelerated free-breathing radial MRI for liver fat quantification demonstrate that the proposed framework can achieve high image quality from undersampled radial data, high accuracy for liver fat quantification, and detect uncertainty caused by noisy input data. The proposed framework achieved 3-fold acceleration to <1 min scan time and reduced the computational time for signal fitting to <100 ms/slice in free-breathing liver fat quantification.</p>","PeriodicalId":74566,"journal":{"name":"Proceedings. IEEE International Symposium on Biomedical Imaging","volume":"2021 ","pages":"433-437"},"PeriodicalIF":0.0000,"publicationDate":"2021-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1109/isbi48211.2021.9433938","citationCount":"5","resultStr":"{\"title\":\"Deep Learning-Based Parameter Mapping with Uncertainty Estimation for Fat Quantification using Accelerated Free-Breathing Radial MRI.\",\"authors\":\"Shu-Fu Shih, Sevgi Gokce Kafali, Tess Armstrong, Xiaodong Zhong, Kara L Calkins, Holden H Wu\",\"doi\":\"10.1109/isbi48211.2021.9433938\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Deep learning has been applied to remove artifacts from undersampled MRI and to replace time-consuming signal fitting in quantitative MRI, but these have usually been treated as separate tasks, which does not fully exploit the shared information. This work proposes a new two-stage framework that completes these two tasks in a concerted approach and also estimates the pixel-wise uncertainty levels. Results from accelerated free-breathing radial MRI for liver fat quantification demonstrate that the proposed framework can achieve high image quality from undersampled radial data, high accuracy for liver fat quantification, and detect uncertainty caused by noisy input data. The proposed framework achieved 3-fold acceleration to <1 min scan time and reduced the computational time for signal fitting to <100 ms/slice in free-breathing liver fat quantification.</p>\",\"PeriodicalId\":74566,\"journal\":{\"name\":\"Proceedings. IEEE International Symposium on Biomedical Imaging\",\"volume\":\"2021 \",\"pages\":\"433-437\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-04-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1109/isbi48211.2021.9433938\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings. IEEE International Symposium on Biomedical Imaging\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/isbi48211.2021.9433938\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2021/5/25 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings. IEEE International Symposium on Biomedical Imaging","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/isbi48211.2021.9433938","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2021/5/25 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
Deep Learning-Based Parameter Mapping with Uncertainty Estimation for Fat Quantification using Accelerated Free-Breathing Radial MRI.
Deep learning has been applied to remove artifacts from undersampled MRI and to replace time-consuming signal fitting in quantitative MRI, but these have usually been treated as separate tasks, which does not fully exploit the shared information. This work proposes a new two-stage framework that completes these two tasks in a concerted approach and also estimates the pixel-wise uncertainty levels. Results from accelerated free-breathing radial MRI for liver fat quantification demonstrate that the proposed framework can achieve high image quality from undersampled radial data, high accuracy for liver fat quantification, and detect uncertainty caused by noisy input data. The proposed framework achieved 3-fold acceleration to <1 min scan time and reduced the computational time for signal fitting to <100 ms/slice in free-breathing liver fat quantification.