苦荞生长素/吲哚乙酸基因家族的全基因组分析及对吲哚-3-乙酸胁迫的响应

Fan Yang, Xiuxia Zhang, Ruifeng Tian, Liwei Zhu, Fang Liu, Qingfu Chen, Xuanjie Shi, Dongao Huo
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引用次数: 0

摘要

生长素/吲哚乙酸(Aux/IAA)家族基因响应激素生长素,参与多种生物过程的调控。本研究通过反复检索和人工标注的方法,鉴定了苦荞(Fagopyrum鞑靼小麦)全部25个Aux/IAA家族基因。我们的研究提供了荞麦Aux/IAA家族基因的全面信息,包括基因结构、染色体位置、系统发育关系和表达模式。Aux/IAA家族基因在荞麦染色体上分布不均匀,经系统发育分析可分为7个类群。通过与拟南芥等粮食作物的进化分析,Aux/IAA家族基因保持了一定的相关性和物种特异性。此外,所有Aux/IAA基因在吲哚-3-乙酸(IAA)处理下均表现出复杂的响应模式。这些结果为解析荞麦Aux/IAA家族基因的功能和分子机制提供了有价值的参考信息。
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Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum)

Auxin/indoleacetic acid (Aux/IAA) family genes respond to the hormone auxin, which have been implicated in the regulation of multiple biological processes. In this study, all 25 Aux/IAA family genes were identified in Tartary buckwheat (Fagopyrum tataricum) by a reiterative database search and manual annotation. Our study provided comprehensive information of Aux/IAA family genes in buckwheat, including gene structures, chromosome locations, phylogenetic relationships, and expression patterns. Aux/IAA family genes were nonuniformly distributed in the buckwheat chromosomes and divided into seven groups by phylogenetic analysis. Aux/IAA family genes maintained a certain correlation and a certain species-specificity through evolutionary analysis with Arabidopsis and other grain crops. In addition, all Aux/IAA genes showed a complex response pattern under treatment of indole-3-acetic acid (IAA). These results provide valuable reference information for dissecting function and molecular mechanism of Aux/IAA family genes in buckwheat.

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Comparative and Functional Genomics
Comparative and Functional Genomics 生物-生化与分子生物学
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