gcCov:全球冠状病毒研究的关联开放数据。

IF 4.5 Q1 MICROBIOLOGY mLife Pub Date : 2022-03-01 Epub Date: 2022-03-16 DOI:10.1002/mlf2.12008
Wenyu Shi, Guomei Fan, Zhihong Shen, Chuan Hu, Juncai Ma, Yuanchun Zhou, Zhen Meng, Songnian Hu, Yuhai Bi, Liang Wang, Haiying Yu, Siru Lin, Xiuqiang Sun, Xinjiao Zhang, Dongmei Liu, Qinlan Sun, Linhuan Wu
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引用次数: 0

摘要

我们提出了一种将公开可用的基因组学和出版资源中的数据映射到资源描述框架(RDF)的方法,并实现了一个发布链接开放数据(LOD)的服务器。作为关于冠状病毒的最大、最全面的语义数据库之一,由此产生的gcCov数据库证明了使用LOD框架中的数据来促进基因型和表型之间相关性的能力。这些相关性将有助于未来对病毒基本机制以及药物和疫苗设计的研究。这些具有62168127个语义三元组的LOD及其可视化可以通过gcCov在https://nmdc.cn/gccov/.
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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gcCov: Linked open data for global coronavirus studies.

We present a method of mapping data from publicly available genomics and publication resources to the Resource Description Framework (RDF) and implement a server to publish linked open data (LOD). As one of the largest and most comprehensive semantic databases about coronaviruses, the resulted gcCov database demonstrates the capability of using data in the LOD framework to promote correlations between genotypes and phenotypes. These correlations will be helpful for future research on fundamental viral mechanisms and drug and vaccine designs. These LOD with 62,168,127 semantic triplets and their visualizations are freely accessible through gcCov at https://nmdc.cn/gccov/.

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