{"title":"运动蛋白脱离轨道对其运输的影响","authors":"Mohd Suhail Rizvi","doi":"10.1007/s10867-022-09613-z","DOIUrl":null,"url":null,"abstract":"<div><p>The transportation of the cargoes in biological cells is primarily driven by the motor proteins on filamentous protein tracks. The stochastic nature of the motion of motor protein often leads to its spontaneous detachment from the track. We formulate a mathematical model to study the effect of the detachment of motor protein on its track bound transport. We calculate two quantities: the distance traveled by the motor protein in given time, and the average time taken by a single motor protein to reach a target distance. Expectedly, both of these quantities decrease with the increasing detachment rate if the motor velocity is kept fixed. However, the existing experimental data suggest that a change in the detachment rate also affects the velocity of the motor protein. This relation between motor protein speed and its detachment rate results in a non-monotonic dependence on the distance traveled in fixed time and transport rate to a fixed distance. Therefore, we demonstrate that optimal motor speeds can be identified for the time and distance controlled conditions.</p></div>","PeriodicalId":612,"journal":{"name":"Journal of Biological Physics","volume":null,"pages":null},"PeriodicalIF":1.8000,"publicationDate":"2022-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s10867-022-09613-z.pdf","citationCount":"0","resultStr":"{\"title\":\"Effect of detachment of motor protein from track on its transport\",\"authors\":\"Mohd Suhail Rizvi\",\"doi\":\"10.1007/s10867-022-09613-z\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The transportation of the cargoes in biological cells is primarily driven by the motor proteins on filamentous protein tracks. The stochastic nature of the motion of motor protein often leads to its spontaneous detachment from the track. We formulate a mathematical model to study the effect of the detachment of motor protein on its track bound transport. We calculate two quantities: the distance traveled by the motor protein in given time, and the average time taken by a single motor protein to reach a target distance. Expectedly, both of these quantities decrease with the increasing detachment rate if the motor velocity is kept fixed. However, the existing experimental data suggest that a change in the detachment rate also affects the velocity of the motor protein. This relation between motor protein speed and its detachment rate results in a non-monotonic dependence on the distance traveled in fixed time and transport rate to a fixed distance. Therefore, we demonstrate that optimal motor speeds can be identified for the time and distance controlled conditions.</p></div>\",\"PeriodicalId\":612,\"journal\":{\"name\":\"Journal of Biological Physics\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2022-10-03\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://link.springer.com/content/pdf/10.1007/s10867-022-09613-z.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Biological Physics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s10867-022-09613-z\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOPHYSICS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biological Physics","FirstCategoryId":"99","ListUrlMain":"https://link.springer.com/article/10.1007/s10867-022-09613-z","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOPHYSICS","Score":null,"Total":0}
Effect of detachment of motor protein from track on its transport
The transportation of the cargoes in biological cells is primarily driven by the motor proteins on filamentous protein tracks. The stochastic nature of the motion of motor protein often leads to its spontaneous detachment from the track. We formulate a mathematical model to study the effect of the detachment of motor protein on its track bound transport. We calculate two quantities: the distance traveled by the motor protein in given time, and the average time taken by a single motor protein to reach a target distance. Expectedly, both of these quantities decrease with the increasing detachment rate if the motor velocity is kept fixed. However, the existing experimental data suggest that a change in the detachment rate also affects the velocity of the motor protein. This relation between motor protein speed and its detachment rate results in a non-monotonic dependence on the distance traveled in fixed time and transport rate to a fixed distance. Therefore, we demonstrate that optimal motor speeds can be identified for the time and distance controlled conditions.
期刊介绍:
Many physicists are turning their attention to domains that were not traditionally part of physics and are applying the sophisticated tools of theoretical, computational and experimental physics to investigate biological processes, systems and materials.
The Journal of Biological Physics provides a medium where this growing community of scientists can publish its results and discuss its aims and methods. It welcomes papers which use the tools of physics in an innovative way to study biological problems, as well as research aimed at providing a better understanding of the physical principles underlying biological processes.