HLA系统因子命名法,2022年1月、2月和3月更新

IF 2.3 4区 医学 Q3 GENETICS & HEREDITY International Journal of Immunogenetics Pub Date : 2022-05-01 DOI:10.1111/iji.12575
Steven G. E. Marsh
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引用次数: 2

摘要

自2021年10月、11月和12月命名法更新以来,以下序列已提交给命名委员会(Marsh,2022),并根据商定的政策,被指定为官方等位基因名称(Marsh等人,2010)。所有序列的全部细节将在即将发布的报告中公布。下面列出了新分配的序列(表1)和先前报告序列的确认(表2)。给出了每个序列的登录号,这些登录号可用于从EMBL、GenBank或DDBJ数据库检索序列文件。尽管数据库已经分配了登录号,并且大多数序列已经可用,但作者仍有可能尚未允许发布该序列;在这种情况下,您将不得不直接联系提交作者。与新序列有关的附加信息通常包含在描述这些等位基因的出版物中;表3中给出了描述新HLA序列的最新出版物的列表。最近又发表了295个等位基因,但由于空间考虑,尚未纳入表3(Turner等人,2022)。此外,等位基因A*02:01:08的序列已被扩展,成为一个新的A*02蛋白变体。等位基因名称A*02:01:08已被放弃,序列更名为A*02:1040。此外,等位基因C*08:01:08的序列已被扩展,并显示为C*08:22蛋白组的新的沉默变体。等位基因名称C*08:01:08已被放弃,序列更名为C*08:22:02。现在,应使用提供的序列提交工具,通过IPD-IMGT/HLAD数据库,将所有新序列和验证序列直接提交给世界卫生组织HLA系统因素命名委员会(Robinson等人,2020)。IPD-IMGT/HLA数据库可通过www.ebi.ac.uk/IPD/IMGT/HLA访问。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Nomenclature for factors of the HLA system, update January, February and March 2022
The following sequences have been submitted to the Nomenclature Committee since theOctober, November andDecember 2021 nomenclature update (Marsh, 2022) and, following agreed policy, have been assigned official allele designations (Marsh et al., 2010). Full details of all sequences will be published in a forthcoming report. Below are listed the newly assigned sequences (Table 1) and confirmations of previously reported sequences (Table 2). The accession number of each sequence is given and these can be used to retrieve the sequence files from the EMBL, GenBank or DDBJ data libraries. Although accession numbers have been assigned by the data-libraries and most sequences are already available, there is still the possibility that an author may not yet have allowed the sequence to be released; in such a case you will have to contact the submitting author directly. Additional information pertaining to new sequences is often included in the publications describing these alleles; a listing of recent publications that describe new HLA sequences is given in Table 3. An additional 295 alleles were recently published but have not been included in Table 3 due to space considerations (Turner et al., 2022). In addition, the sequence for the allele A*02:01:08 has been extended to become a new A*02 protein variant. The allele name A*02:01:08 has been abandoned and the sequence renamed A*02:1040. Furthermore, the sequence for the allele C*08:01:08 has been extended and shown to be a new silent variant of the C*08:22 protein group. The allele name C*08:01:08 has been abandoned and the sequence renamed C*08:22:02. All new and confirmatory sequences should now be submitted directly to the WHO Nomenclature Committee for Factors of the HLA System via the IPD-IMGT/HLADatabase using the sequence submission tool provided (Robinson et al., 2020). The IPD-IMGT/HLA Databasemay be accessed via www.ebi.ac.uk/ipd/imgt/hla.
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来源期刊
CiteScore
4.70
自引率
0.00%
发文量
48
审稿时长
6-12 weeks
期刊介绍: The International Journal of Immunogenetics (formerly European Journal of Immunogenetics) publishes original contributions on the genetic control of components of the immune system and their interactions in both humans and experimental animals. The term ''genetic'' is taken in its broadest sense to include studies at the evolutionary, molecular, chromosomal functional and population levels in both health and disease. Examples are: -studies of blood groups and other surface antigens- cell interactions and immune response- receptors, antibodies, complement components and cytokines- polymorphism- evolution of the organisation, control and function of immune system components- anthropology and disease associations- the genetics of immune-related disease: allergy, autoimmunity, immunodeficiency and other immune pathologies- All papers are seen by at least two independent referees and only papers of the highest quality are accepted.
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