温泉国家公园内温泉中的微生物多样性

E. T. Stone, R. Murray, M. Moran
{"title":"温泉国家公园内温泉中的微生物多样性","authors":"E. T. Stone, R. Murray, M. Moran","doi":"10.54119/jaas.2018.7232","DOIUrl":null,"url":null,"abstract":"The thermal water systems of Hot Springs National Park (HSNP) in Hot Springs, Arkansas exist in relative isolation from other North American thermal systems. The HSNP waters could therefore serve as a unique center of thermophilic microbial biodiversity. However, these springs remain largely unexplored using cultureindependent next generation sequencing techniques to classify species of thermophilic organisms. Additionally, HSNP has been the focus of anthropogenic development, capping and diverting the springs for use in recreational bathhouse facilities. Human modification of these springs may have impacted the structure of these bacterial communities compared to springs left in a relative natural state. The goal of this study was to compare the community structure in two capped springs and two uncapped springs in HSNP, as well as broadly survey the microbial diversity of the springs. We used Illumina 16S rRNA sequencing of water samples from each spring, the QIIME workflow for sequence analysis, and generated measures of genera and phyla richness, diversity, and evenness. In total, over 700 genera were detected and most individual samples had more than 100 genera. There were also several uncharacterized sequences that could not be placed in known taxa, indicating the sampled springs contain undescribed bacteria. There was great variation both between sites and within samples, so no significant differences were detected in community structure between sites. Our results suggest that these springs, regardless of their human modification, contain a considerable amount of biodiversity, some of it potentially unique to the study site.","PeriodicalId":30423,"journal":{"name":"Journal of the Arkansas Academy of Science","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2018-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Microbial diversity in the thermal springs within Hot Springs National Park\",\"authors\":\"E. T. Stone, R. Murray, M. Moran\",\"doi\":\"10.54119/jaas.2018.7232\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The thermal water systems of Hot Springs National Park (HSNP) in Hot Springs, Arkansas exist in relative isolation from other North American thermal systems. The HSNP waters could therefore serve as a unique center of thermophilic microbial biodiversity. However, these springs remain largely unexplored using cultureindependent next generation sequencing techniques to classify species of thermophilic organisms. Additionally, HSNP has been the focus of anthropogenic development, capping and diverting the springs for use in recreational bathhouse facilities. Human modification of these springs may have impacted the structure of these bacterial communities compared to springs left in a relative natural state. The goal of this study was to compare the community structure in two capped springs and two uncapped springs in HSNP, as well as broadly survey the microbial diversity of the springs. We used Illumina 16S rRNA sequencing of water samples from each spring, the QIIME workflow for sequence analysis, and generated measures of genera and phyla richness, diversity, and evenness. In total, over 700 genera were detected and most individual samples had more than 100 genera. There were also several uncharacterized sequences that could not be placed in known taxa, indicating the sampled springs contain undescribed bacteria. There was great variation both between sites and within samples, so no significant differences were detected in community structure between sites. Our results suggest that these springs, regardless of their human modification, contain a considerable amount of biodiversity, some of it potentially unique to the study site.\",\"PeriodicalId\":30423,\"journal\":{\"name\":\"Journal of the Arkansas Academy of Science\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2018-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of the Arkansas Academy of Science\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.54119/jaas.2018.7232\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of the Arkansas Academy of Science","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.54119/jaas.2018.7232","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2

摘要

位于阿肯色州温泉市的温泉国家公园(HSNP)的热水系统与其他北美热系统相对隔离。因此,HSNP水域可以作为嗜热微生物生物多样性的独特中心。然而,这些温泉在很大程度上仍未被利用独立于培养的下一代测序技术来对嗜热生物进行分类。此外,HSNP一直是人为开发的焦点,将温泉封顶并转移到娱乐浴室设施中。与处于相对自然状态的泉水相比,人类对这些泉水的修改可能会影响这些细菌群落的结构。本研究的目的是比较两种盖顶弹簧和两种未盖顶弹簧的HSNP群落结构,并广泛调查弹簧的微生物多样性。我们使用Illumina 16S rRNA对每个春季的水样进行测序,QIIME工作流程进行序列分析,并生成属和门的丰富度,多样性和均匀性的测量。总共检测到700多个属,大多数单个样本的属数超过100个。也有一些未被表征的序列不能被放置在已知的分类群中,这表明采样的泉水含有未被描述的细菌。群落结构在样点间和样点内均存在较大差异,未发现显著性差异。我们的研究结果表明,这些泉水,无论人类如何改造,都含有相当数量的生物多样性,其中一些可能是研究地点所独有的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Microbial diversity in the thermal springs within Hot Springs National Park
The thermal water systems of Hot Springs National Park (HSNP) in Hot Springs, Arkansas exist in relative isolation from other North American thermal systems. The HSNP waters could therefore serve as a unique center of thermophilic microbial biodiversity. However, these springs remain largely unexplored using cultureindependent next generation sequencing techniques to classify species of thermophilic organisms. Additionally, HSNP has been the focus of anthropogenic development, capping and diverting the springs for use in recreational bathhouse facilities. Human modification of these springs may have impacted the structure of these bacterial communities compared to springs left in a relative natural state. The goal of this study was to compare the community structure in two capped springs and two uncapped springs in HSNP, as well as broadly survey the microbial diversity of the springs. We used Illumina 16S rRNA sequencing of water samples from each spring, the QIIME workflow for sequence analysis, and generated measures of genera and phyla richness, diversity, and evenness. In total, over 700 genera were detected and most individual samples had more than 100 genera. There were also several uncharacterized sequences that could not be placed in known taxa, indicating the sampled springs contain undescribed bacteria. There was great variation both between sites and within samples, so no significant differences were detected in community structure between sites. Our results suggest that these springs, regardless of their human modification, contain a considerable amount of biodiversity, some of it potentially unique to the study site.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
审稿时长
20 weeks
期刊最新文献
Yellow-rumped Warblers (Setophaga coronata) Sipping Sap from Sapsucker Wells Factors Affecting the Sex Ratio of White-tailed Deer (Odocoileus virginianus) Fetuses in Arkansas Seasonal Testicular Histology and Acystic Lobular Spermatogenesis in the Western Lesser Siren, Siren intermedia nettingi (Caudata: Sirenidae) A Study of Dental Pathology in River Otters (Lontra canadensis) in Arkansas Distal Urogenital Anatomy in the Male Wood Frog, Lithobates sylvaticus (Anura: Ranidae)
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1