灰鲭鱼(Thunnus tonggol)的基因多样性,根据线粒体DNA部署在廖内群岛的sarow鱼市场

Suryany Devy, Ida Ayu Astarini, I. N. W. Putra, Andrianus Sembiring, Luh Astria Yusmalinda, M. Malik, Ni Putu Dian Pertiwi
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摘要

长尾金枪鱼(Thunnus tonggol)为辐鳍鱼纲水珍鱼目钩尾鱼科的其中一种。通哥T.tonggol是一种海洋微生物,通常在印度洋-太平洋地区的热带和亚热带水域发现。尽管被称为金枪鱼物种之一,但该物种的信息非常缺乏,尤其是在印度尼西亚。因此,本研究旨在确定在廖内岛巴淡岛萨古隆鱼市采集的长尾金枪鱼(T.tonggol)的遗传多样性和亲缘关系。使用遗传标记即线粒体D环(对照区域)进行分子分析,包括DNA提取、聚合酶链式反应、电泳、测序和数据分析。通过分子鉴定,共鉴定出21个长尾金枪鱼样本,并确认为T.tonggol物种,其碱基长度为482-523bp(碱基对)。长尾金枪鱼的单倍型多样性(Hd)为100000,核苷酸多样性(?)为001654。系统发育树重建结果表明,采集到的所有样本都属于同一组(分支),其中一个T.tonggol分支的平均遗传距离为0.010,样本之间关系密切。这一结果可作为印尼长尾金枪鱼物种的补充信息。
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Keragaman Genetik Ikan Tongkol Abu-Abu (Thunnus tonggol) yang Didaratkan di Pasar Ikan Sagulung, Batam, Kepulauan Riau Berdasarkan DNA Mitokondria
Longtail Tuna (Thunnus tonggol) is one of the neritic species of tuna from the Scrombridae family. T. tonggol is oceanicromus and ussually found in tropical and subtropical waters in the Indo-Pacific region. Although known as one of the tuna species, the information of this species is very lacking, especially in Indonesia. Therefore, this study aims to determine the genetic diversity and kinship relationships of longtail tuna (T. tonggol) collected at Sagulung fish market, Batam, Riau Islands. Molecular analysis were carried out using genetic markers namely mitochondrial D-loop (control regian) with the stages of DNA extraction, PCR (Polymerase Chain Reaction), electrophoresis, sequencing, and data analysis. A total of 21 longtail tuna samples were identified using molecularly and confirmed as T. tonggol species, which have a base length ranging from 482 - 523 bp (base pairs). The value of haplotype diversity (Hd) of longtail tuna was 1,00000 and the value of nucleotide diversity (?) was 0,01654. The results of phylogenetic tree reconstruction showed that all samples collected were in the same group (clade) with the average genetic distance in one T. tonggol clade obtained a value of 0.010 which has a close relationship between samples. This result can be use as additional information for longtail tuna species in Indonesia.
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