高加索Parsley蛙Pelodytes caucasicus的遗传多样性(Anura:Pelodytidae)

IF 0.6 4区 生物学 Q4 ZOOLOGY Zoology in the Middle East Pub Date : 2022-03-10 DOI:10.1080/09397140.2022.2051917
T. Ergül Kalaycı, K. Gümüşsoy
{"title":"高加索Parsley蛙Pelodytes caucasicus的遗传多样性(Anura:Pelodytidae)","authors":"T. Ergül Kalaycı, K. Gümüşsoy","doi":"10.1080/09397140.2022.2051917","DOIUrl":null,"url":null,"abstract":"Caucasia is a global biodiversity hotspot, rich in amphibians, including several endemic species. We sequenced samples from Parsley frogs (genus Pelodytes) across their Anatolian range to generate a barcode reference database and to assess patterns of genetic diversity in the species. Different species delimitation methods (ABGD, ASAP, GMYC and PTP) were applied to assess species diversity in the genus Pelodytes based on published and newly obtained mtDNA sequences. A majority of the species delimitation tests (ABGD, GMYC and ASAP) recovered four taxonomic units corresponding to currently accepted taxonomy (P. atlanticus, P. caucasicus, P. ibericus and P. punctatus). PTP, on the other hand, recovered only two taxonomic units, one combining the three Iberian taxa (P. atlanticus, P. ibericus, and P. punctatus), and the other, P. caucasicus. In Anatolia, individuals from Giresun and Trabzon were found to be genetically closer to each other compared to those from Rize and Artvin, based on genetic distances and phylogenetic and haplotype network analyses.","PeriodicalId":24024,"journal":{"name":"Zoology in the Middle East","volume":"68 1","pages":"218 - 224"},"PeriodicalIF":0.6000,"publicationDate":"2022-03-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Genetic diversity of the Caucasian Parsley Frog, Pelodytes caucasicus (Anura: Pelodytidae)\",\"authors\":\"T. Ergül Kalaycı, K. Gümüşsoy\",\"doi\":\"10.1080/09397140.2022.2051917\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Caucasia is a global biodiversity hotspot, rich in amphibians, including several endemic species. We sequenced samples from Parsley frogs (genus Pelodytes) across their Anatolian range to generate a barcode reference database and to assess patterns of genetic diversity in the species. Different species delimitation methods (ABGD, ASAP, GMYC and PTP) were applied to assess species diversity in the genus Pelodytes based on published and newly obtained mtDNA sequences. A majority of the species delimitation tests (ABGD, GMYC and ASAP) recovered four taxonomic units corresponding to currently accepted taxonomy (P. atlanticus, P. caucasicus, P. ibericus and P. punctatus). PTP, on the other hand, recovered only two taxonomic units, one combining the three Iberian taxa (P. atlanticus, P. ibericus, and P. punctatus), and the other, P. caucasicus. In Anatolia, individuals from Giresun and Trabzon were found to be genetically closer to each other compared to those from Rize and Artvin, based on genetic distances and phylogenetic and haplotype network analyses.\",\"PeriodicalId\":24024,\"journal\":{\"name\":\"Zoology in the Middle East\",\"volume\":\"68 1\",\"pages\":\"218 - 224\"},\"PeriodicalIF\":0.6000,\"publicationDate\":\"2022-03-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Zoology in the Middle East\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/09397140.2022.2051917\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"ZOOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Zoology in the Middle East","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/09397140.2022.2051917","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"ZOOLOGY","Score":null,"Total":0}
引用次数: 1

摘要

高加索地区是全球生物多样性的热点地区,两栖动物丰富,包括几种特有物种。我们对在安纳托利亚范围内的欧芹蛙(Parsley genus Pelodytes)样本进行了测序,以生成条形码参考数据库,并评估该物种的遗传多样性模式。采用不同的物种划分方法(ABGD、ASAP、GMYC和PTP),基于已发表的和新获得的mtDNA序列对Pelodytes属的物种多样性进行了评估。大多数种界试验(ABGD、GMYC和ASAP)都恢复了与目前公认的分类(P. atlanticus、P. caucasicus、P. ibericus和P. punctatus)相对应的4个分类单位。另一方面,PTP只恢复了两个分类单位,一个是由三个伊比利亚分类群(P. atlanticus、P. ibericus和P. punctatus)组成的,另一个是P. caucasicus。在安纳托利亚,根据遗传距离、系统发育和单倍型网络分析,发现来自Giresun和Trabzon的个体在遗传上比来自Rize和Artvin的个体更接近。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Genetic diversity of the Caucasian Parsley Frog, Pelodytes caucasicus (Anura: Pelodytidae)
Caucasia is a global biodiversity hotspot, rich in amphibians, including several endemic species. We sequenced samples from Parsley frogs (genus Pelodytes) across their Anatolian range to generate a barcode reference database and to assess patterns of genetic diversity in the species. Different species delimitation methods (ABGD, ASAP, GMYC and PTP) were applied to assess species diversity in the genus Pelodytes based on published and newly obtained mtDNA sequences. A majority of the species delimitation tests (ABGD, GMYC and ASAP) recovered four taxonomic units corresponding to currently accepted taxonomy (P. atlanticus, P. caucasicus, P. ibericus and P. punctatus). PTP, on the other hand, recovered only two taxonomic units, one combining the three Iberian taxa (P. atlanticus, P. ibericus, and P. punctatus), and the other, P. caucasicus. In Anatolia, individuals from Giresun and Trabzon were found to be genetically closer to each other compared to those from Rize and Artvin, based on genetic distances and phylogenetic and haplotype network analyses.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
1.60
自引率
14.30%
发文量
38
审稿时长
>12 weeks
期刊介绍: Zoology in the Middle East is a journal which publishes original papers and review papers on ecology, zoogeography, animal biology, biodiversity, faunistics, systematics and morphology of the Middle East. It seeks to further the understanding of the Middle East as a zoogeographic unit and aims at improving the interchange of knowledge and ideas between specialists on different subjects and taxa.
期刊最新文献
Diet of the European Pond Turtle (Emys orbicularis) in Anzali Lagoon (South Caspian Sea) Anomalous fur colouration in eight small mammal species from Türkiye Taxonomic house-keeping: redescriptions of three poorly known pseudoscorpions described in the 19th century (Pseudoscorpiones: Atemnidae, Chernetidae) On a new species, Syzeuctus jordanicus sp. n., from the Middle East (Hymenoptera: Ichneumonidae) Range expansion in the Golden Jackal, Canis aureus Linnaeus, 1758 (Canidae: Carnivora), into the Sinai Peninsula, Egypt
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1