基因组学时代的豆类研究进展

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2019-12-19 DOI:10.1071/SB19019
A. Egan, M. Vatanparast
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引用次数: 8

摘要

下一代测序(NGS)技术和应用使豆类生物学取得了许多关键进展,从标记发现到全基因组测序,并将为未来的豆类研究提供许多新途径。特别是在过去的6年里,由于高通量测序的使用,豆类科学取得了革命性的进展,包括开发了许多类型的标记和数据,这些标记和数据可用于物种水平以上和以下的进化研究,从而解决了以前无法实现的关系。反过来,这种解决方案为假设检验和推断提供了机会,以提高我们对豆类生物多样性以及创造地球上最多样化植物家族之一的模式和过程的理解。此外,在基因组学时代,我们对豆类生态学的理解取得了重大进展,包括它们在全球生态系统中作为氮固定剂的作用。通过NGS平台以测序基因组和基因表达谱的形式积累遗传和基因组数据也极大地影响了植物育种和保护工作。在这里,我们从进化、生态学以及遗传和基因组资源开发的角度总结了NGS方法在豆类生物学中获得的知识。
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Advances in legume research in the genomics era
Next-generation sequencing (NGS) technologies and applications have enabled numerous critical advances in legume biology, from marker discovery to whole-genome sequencing, and will provide many new avenues for legume research in the future. The past 6 years in particular have seen revolutionary advances in legume science because of the use of high-throughput sequencing, including the development of numerous types of markers and data useful for evolutionary studies above and below the species level that have enabled resolution of relationships that were previously unattainable. Such resolution, in turn, affords opportunities for hypothesis testing and inference to improve our understanding of legume biodiversity and the patterns and processes that have created one of the most diverse plant families on earth. In addition, the genomics era has seen significant advances in our understanding of the ecology of legumes, including their role as nitrogen fixers in global ecosystems. The accumulation of genetic and genomic data in the form of sequenced genomes and gene-expression profiles made possible through NGS platforms has also vastly affected plant-breeding and conservation efforts. Here, we summarise the knowledge gains enabled by NGS methods in legume biology from the perspectives of evolution, ecology, and development of genetic and genomic resources.
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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