蚕豆高效根瘤菌的遗传图谱及多样性研究

Doha M. Fathy, A. Eldomiaty, H. I. A. El-Fattah, E. Mahgoub, A. Hassanin
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引用次数: 1

摘要

从埃及两个省(Dakahlia和Damitta)收集了一组20株蚕豆根瘤菌分离株。进一步对分离菌株进行形态和生理表征,考察其在蚕豆植株上的生长和共生性能。根据实验室和盆栽试验,选择了5株根瘤菌(Rh 32、Rh 6-A、Rh 3-4、Rh RL3和Rh 8-A),并进行了进一步的生化和分子表征。利用6条issr引物对5株有潜力的根瘤菌进行了遗传图谱分析。细菌基因组DNA扩增共产生37个基因组位点,其中54%为多态性,46%为单态。多态性率在25% ~ 80%之间,平均为54%。形态学和生理数据的聚类分析将20株根瘤菌分在5个聚类中,5个被选根瘤菌相互靠近。ISSR数据聚类分析将5株根瘤菌分在4个聚类中。ISSR分析显示,Rh 6-A和Rh 3-4分离株的遗传距离最低为2.00,Rh 32与Rh 6-A、Rh 3-4和Rh RL3分离株的遗传距离最高为3.61。Rh - 6-A与Rh - 3-4菌株的相似性测量值最高,为0.931;Rh 32与Rh 3-4的相似性最低,为0.745。结果表明,基于分子数据的聚类模式分析可用于根瘤菌分离株的筛选,这些分离株有望作为生物固氮和促进植物生长的基因来源。
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GENETIC PROFILING AND DIVERSITY OF SOME PROMISING EFFICIENT RHIZOBIAL ISOLATES ON FABA BEAN PLANTS
A group of twenty faba bean rhizobial isolates was collected from two Egyptian Governorates (Dakahlia and Damitta). The isolates were further morphologically and physiologically characterized to check their growth and symbiotic performance on faba bean plants. According to remarkable lab and pots tests, five rhizobial isolates (Rh 32, Rh 6-A, Rh 3-4, Rh RL3, and Rh 8-A) were selected and subjected to further biochemical and molecular characterizations. Genetic profiling of the five promising rhizobial isolates was conducted using six ISSR-primers. Amplification of bacterial genomic DNA produced a total of 37 genomic loci, 54% of them were polymorphic and 46% were monomorphic. The rate of polymorphism ranged between 25% to 80% with an average of 54%. Clustering pattern analysis of morphological and physiological data grouped the twenty rhizobial isolates in five clusters and the five selected rhizobial isolates were falling close to each other. Clustering analysis of ISSR data grouped the the five rhizobial isolates in four clusters. Analysis based on ISSR data revealed that the lowest genetic distance was 2.00 between Rh 6-A and Rh 3-4 isolates, while the highest genetic distance of 3.61 was between Rh 32 and each of Rh 6-A, Rh 3-4, and Rh RL3 isolates. The greatest similarity measurement was 0.931 between Rh 6-A and Rh 3-4 isolates; while the lowest similarity was 0.745 between Rh 32 and Rh 3-4 isolates. It can concluded that clustering pattern analysis based on molecular data could be used in facilitating the selection of rhizobial isolates that will be promising as a source of genes for biological nitrogen fixation and plant growth-promotion.
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