从土耳其淡水资源中捕获的圆腹蛛双口虫的鉴定和分子研究

Q4 Agricultural and Biological Sciences Genetics of Aquatic Organisms Pub Date : 2021-12-20 DOI:10.4194/ga454
Sibel Doğan Barata, M. Dörücü, Murad Gürses
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引用次数: 0

摘要

在本研究中,对寄生在卡拉卡亚大坝湖、科班大坝湖和哈扎尔湖(Elazığ省)自然分布的Capoeta umbla鱼眼睛中的双口虫标本线粒体DNA中的细胞色素c氧化酶亚基I(COI)基因区域进行了鉴定。使用mtCOI基因区域的序列分析确定了总共8个单倍型,并通过最大似然(ML)、邻居连接(NJ)、最小进化(ME)和贝叶斯方法基于这些单倍型确定遗传距离来构建系统发育树。结果表明,最低遗传距离为000209,最高遗传距离为001264。系统发育分析显示单倍型3和单倍型4之间的关系更密切。据评估,所有研究的样本都属于匙形双口菌,寄生虫可能是由主要宿主在研究地点之间传播的。
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Identification and Molecular Investigation of Diplostomum in Capoeta umbla Caught from Freshwater Sources, Turkey
In this study, identification of the cytochrome c oxidase subunit I (COI) gene region in mitochondrial DNA of the Diplostomum specimens, which are parasitic in the eyes of Capoeta umbla fish naturally distributed in Karakaya Dam Lake, Keban Dam Lake and Lake Hazar, (Elazığ province) was performed. A total of 8 haplotypes were determined using sequence analysis of the mtCOI gene region and phylogenetic trees were constructed by determining the genetic distance based on these haplotypes by the Maximum Likelihood (ML), Neighbor Joining (NJ), Minimum Evolution (ME) and Bayes methods. As a result, the lowest genetic distance was 0,00209 and the highest genetic distance was 0,01264. Phylogenetic analysis revealed a closer relationship between haplotype 3 and haplotype 4. It has been evaluated that all the samples studied belong to Diplostomum spathaceum and that the parasite may have been spread by the main hosts between study sites.
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来源期刊
Genetics of Aquatic Organisms
Genetics of Aquatic Organisms Agricultural and Biological Sciences-Aquatic Science
CiteScore
0.90
自引率
0.00%
发文量
8
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