一种用于前列腺癌症MRI多区域发现的通用Bayesian函数空间划分方法

IF 4.9 2区 数学 Q1 MATHEMATICS, INTERDISCIPLINARY APPLICATIONS Bayesian Analysis Pub Date : 2024-06-01 Epub Date: 2024-06-28 DOI:10.1214/23-ba1366
Maria Masotti, Lin Zhang, Gregory J Metzger, Joseph S Koopmeiners
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引用次数: 0

摘要

目前使用多参数磁共振成像(mpMRI)估算前列腺癌灶数量、大小和位置的方法高度依赖于读者的经验和专业知识。自动体素癌症分类器不能直接提供对临床有重要意义的癌症病灶数量、位置和大小的估计值。现有的空间分区方法估计的是线性或片段线性边界,用于分隔空间注册数据中的局部静止区域,不足以应用于病灶检测。频数分割和聚类方法通常需要预先指定聚类的数量,而且不能量化不确定性。此前,我们开发了一种新颖的贝叶斯功能空间分区方法,利用 mpMRI 数据估计单个癌症病灶周围的边界。我们提出了一种贝叶斯功能空间分区方法,用于未知病灶数量的多病灶检测。我们的方法利用功能估计对每个癌症病灶周围的平滑边界曲线进行建模。在可逆跃迁马尔可夫链蒙特卡洛(RJ-MCMC)框架中,我们开发了新颖的跃迁步骤,以联合估计和量化病灶数量、病灶边界和每个病灶空间参数的不确定性。通过模拟,我们表明我们的方法对病变形状、病变数量和特定区域的空间过程具有鲁棒性。我们通过使用核磁共振成像检测前列腺癌病灶来说明我们的方法。
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A General Bayesian Functional Spatial Partitioning Method for Multiple Region Discovery Applied to Prostate Cancer MRI.

Current protocols to estimate the number, size, and location of cancerous lesions in the prostate using multiparametric magnetic resonance imaging (mpMRI) are highly dependent on reader experience and expertise. Automatic voxel-wise cancer classifiers do not directly provide estimates of number, location, and size of cancerous lesions that are clinically important. Existing spatial partitioning methods estimate linear or piecewise-linear boundaries separating regions of local stationarity in spatially registered data and are inadequate for the application of lesion detection. Frequentist segmentation and clustering methods often require pre-specification of the number of clusters and do not quantify uncertainty. Previously, we developed a novel Bayesian functional spatial partitioning method to estimate the boundary surrounding a single cancerous lesion using data derived from mpMRI. We propose a Bayesian functional spatial partitioning method for multiple lesion detection with an unknown number of lesions. Our method utilizes functional estimation to model the smooth boundary curves surrounding each cancerous lesion. In a Reversible Jump Markov Chain Monte Carlo (RJ-MCMC) framework, we develop novel jump steps to jointly estimate and quantify uncertainty in the number of lesions, their boundaries, and the spatial parameters in each lesion. Through simulation we show that our method is robust to the shape of the lesions, number of lesions, and region-specific spatial processes. We illustrate our method through the detection of prostate cancer lesions using MRI.

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来源期刊
Bayesian Analysis
Bayesian Analysis 数学-数学跨学科应用
CiteScore
6.50
自引率
13.60%
发文量
59
审稿时长
>12 weeks
期刊介绍: Bayesian Analysis is an electronic journal of the International Society for Bayesian Analysis. It seeks to publish a wide range of articles that demonstrate or discuss Bayesian methods in some theoretical or applied context. The journal welcomes submissions involving presentation of new computational and statistical methods; critical reviews and discussions of existing approaches; historical perspectives; description of important scientific or policy application areas; case studies; and methods for experimental design, data collection, data sharing, or data mining. Evaluation of submissions is based on importance of content and effectiveness of communication. Discussion papers are typically chosen by the Editor in Chief, or suggested by an Editor, among the regular submissions. In addition, the Journal encourages individual authors to submit manuscripts for consideration as discussion papers.
期刊最新文献
How Trustworthy Is Your Tree? Bayesian Phylogenetic Effective Sample Size Through the Lens of Monte Carlo Error. A General Bayesian Functional Spatial Partitioning Method for Multiple Region Discovery Applied to Prostate Cancer MRI. Posterior Shrinkage Towards Linear Subspaces Dynamic Functional Variable Selection for Multimodal mHealth Data Heavy-Tailed NGG-Mixture Models
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