迷迭香分子肌醇的蛋白靶点定位:计算机对接研究和网络药理学

IF 2.3 Q3 PHARMACOLOGY & PHARMACY Scientia Pharmaceutica Pub Date : 2023-04-10 DOI:10.3390/scipharm91020019
María Taboada-Alquerque, Danilo Pajaro-Valenzuela, K. Caballero-Gallardo, A. Cifuentes, E. Ibáñez, M. Ahumedo-Monterrosa, E. Stashenko, J. Olivero-Verbel
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引用次数: 0

摘要

Carnosol是迷迭香中的一种天然二萜,具有抗肿瘤和抗炎特性。尽管它很重要,但肉酚和人类靶点之间相互作用的药理学机制仍不清楚。其目的是确定肉酚和网络药理学的合理人类靶点。采用HPLC-QTOF-MS/MS对迷迭香进行分析。使用对接和公共数据库(CTD)确定了潜在的肉酚目标。使用AutoDock Vina针对708种人类蛋白质筛选Carnosol,并使用亲和值作为优先标准。将目标集上传到WebGestalt以获得基因本体论(GO)和KEGG通路富集分析。HPLC-QTOF-MS/MS分析允许对九种化学物质进行初步注释,其中木酚是电离最多的。肉酚有53个可能的靶标,其中20个通过虚拟筛选鉴定,包括Hsp90α(−10.9 kcal/mol)、AKR1C3(−10.4 kcal/mol。用PPI和分子对接鉴定的肉酚的潜在靶标是HSP90AA1、MAPK1、MAPK3、CAT、JUN、AHR和CASP3。GO术语和KEGG通路分析发现,carnosol与感染(Chagas、甲型流感、弓形虫病和百日咳)和炎症(IL-17和TNF信号通路以及Th-17细胞分化)密切相关。这些结果表明,肉酚可以诱导免疫炎症反应。
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Mapping Protein Targets of Carnosol, a Molecule Identified in Rosmarinus officinalis: In Silico Docking Studies and Network Pharmacology
Carnosol is a natural diterpene present in Rosmarinus officinalis L. (rosemary) with anti-tumor and anti-inflammatory properties. Despite its importance, the pharmacological mechanisms underlying the interactions between carnosol and human targets are still unclear. The goal was to identify plausible human target for carnosol and the network pharmacology. Rosemary was analyzed using HPLC-QTOF-MS/MS. Potential carnosol targets were identified using docking and a public database (CTD). Carnosol was screened against 708 human proteins using AutoDock Vina, and affinity values were used as prioritization criteria. The targets set was uploaded to WebGestalt to obtain Gene Ontology (GO) and KEGG pathway enrichment analysis. HPLC-QTOF-MS/MS analyses allowed the tentative annotation of nine chemicals, with carnosol being the most ionized. There were 53 plausible targets for carnosol, with 20 identified using virtual screening, including Hsp90α (−10.9 kcal/mol), AKR1C3 (−10.4 kcal/mol), and Hsp90β (−10.4 kcal/mol), and 33 identified from CTD. The potential targets for carnosol identified with PPI and molecular docking were HSP90AA1, MAPK1, MAPK3, CAT, JUN, AHR, and CASP3. GO terms and KEGG pathways analysis found that carnosol is closely related to infection (Chagas, influenza A, toxoplasmosis, and pertussis) and inflammation (IL-17 and TNF signaling pathway and Th-17 cell differentiation). These results demonstrated that carnosol may induce an immuno-inflammatory response.
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来源期刊
Scientia Pharmaceutica
Scientia Pharmaceutica Pharmacology, Toxicology and Pharmaceutics-Pharmaceutical Science
CiteScore
4.60
自引率
4.00%
发文量
67
审稿时长
10 weeks
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