S. Masaeli, P. G. Mostafavi, H. H. Sahafi, S. T. Jahromi, A. Nabinejad, V. Noaman
{"title":"研究论文:波斯湾双壳类动物科(蜘蛛科、蜘蛛科、蜘蛛科、蜘蛛科)的分子系统发育","authors":"S. Masaeli, P. G. Mostafavi, H. H. Sahafi, S. T. Jahromi, A. Nabinejad, V. Noaman","doi":"10.22092/IJFS.2021.123480","DOIUrl":null,"url":null,"abstract":"Bivalvia is one of the least studied classes of the Persian Gulf. A survey and molecular analysis was conducted to determine bivalve species diversity in the Persian Gulf. To the best of our knowledge, this is the first report of barcoding data on bivalves of the Persian Gulf. We examined 40 individuals representing 8 species, 6 genera and 5 families. We collected samples from Hengam, Larak and Qeshm Islands and Bandar Lengeh in Persian Gulf, Iran. After DNA extraction, mitochondrial 16S ribosomal DNA (16SrDNA) and Cytochrome Oxidase subunit I were amplified by polymerase chain reaction (PCR). Based on obtained 16SrDNA and COI gene sequences and maximum parsimony, neighbor joining and maximum likelihood trees of these genes there was no overlap between maximum Kimura 2- parameter distance among conspecifics. Most species formed agglutinate sequence units with a small amount of changes. Eventually, comparison of the 8 selected studied species with metadata from India, Brazil, Japan, China, and America exposed that these species in Persian Gulf are classified in sister clades with high bootstraps except Pinctada. Since there is not much work on bivalves identification in the Persian Gulf, larger sampling and more research is needed to investigate mollusc diversity in this area.","PeriodicalId":14569,"journal":{"name":"Iranian Journal of Fisheries Sciences","volume":"20 1","pages":"96-108"},"PeriodicalIF":0.8000,"publicationDate":"2021-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Research Article: Molecular phylogeny of bivalve families (Arcidae, Chamidae, Margaritidae, Ostreidae, Veneridae) in the Persian Gulf\",\"authors\":\"S. Masaeli, P. G. Mostafavi, H. H. Sahafi, S. T. Jahromi, A. Nabinejad, V. Noaman\",\"doi\":\"10.22092/IJFS.2021.123480\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Bivalvia is one of the least studied classes of the Persian Gulf. A survey and molecular analysis was conducted to determine bivalve species diversity in the Persian Gulf. To the best of our knowledge, this is the first report of barcoding data on bivalves of the Persian Gulf. We examined 40 individuals representing 8 species, 6 genera and 5 families. We collected samples from Hengam, Larak and Qeshm Islands and Bandar Lengeh in Persian Gulf, Iran. After DNA extraction, mitochondrial 16S ribosomal DNA (16SrDNA) and Cytochrome Oxidase subunit I were amplified by polymerase chain reaction (PCR). Based on obtained 16SrDNA and COI gene sequences and maximum parsimony, neighbor joining and maximum likelihood trees of these genes there was no overlap between maximum Kimura 2- parameter distance among conspecifics. Most species formed agglutinate sequence units with a small amount of changes. Eventually, comparison of the 8 selected studied species with metadata from India, Brazil, Japan, China, and America exposed that these species in Persian Gulf are classified in sister clades with high bootstraps except Pinctada. Since there is not much work on bivalves identification in the Persian Gulf, larger sampling and more research is needed to investigate mollusc diversity in this area.\",\"PeriodicalId\":14569,\"journal\":{\"name\":\"Iranian Journal of Fisheries Sciences\",\"volume\":\"20 1\",\"pages\":\"96-108\"},\"PeriodicalIF\":0.8000,\"publicationDate\":\"2021-01-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Iranian Journal of Fisheries Sciences\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://doi.org/10.22092/IJFS.2021.123480\",\"RegionNum\":4,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"FISHERIES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Iranian Journal of Fisheries Sciences","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.22092/IJFS.2021.123480","RegionNum":4,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"FISHERIES","Score":null,"Total":0}
Research Article: Molecular phylogeny of bivalve families (Arcidae, Chamidae, Margaritidae, Ostreidae, Veneridae) in the Persian Gulf
Bivalvia is one of the least studied classes of the Persian Gulf. A survey and molecular analysis was conducted to determine bivalve species diversity in the Persian Gulf. To the best of our knowledge, this is the first report of barcoding data on bivalves of the Persian Gulf. We examined 40 individuals representing 8 species, 6 genera and 5 families. We collected samples from Hengam, Larak and Qeshm Islands and Bandar Lengeh in Persian Gulf, Iran. After DNA extraction, mitochondrial 16S ribosomal DNA (16SrDNA) and Cytochrome Oxidase subunit I were amplified by polymerase chain reaction (PCR). Based on obtained 16SrDNA and COI gene sequences and maximum parsimony, neighbor joining and maximum likelihood trees of these genes there was no overlap between maximum Kimura 2- parameter distance among conspecifics. Most species formed agglutinate sequence units with a small amount of changes. Eventually, comparison of the 8 selected studied species with metadata from India, Brazil, Japan, China, and America exposed that these species in Persian Gulf are classified in sister clades with high bootstraps except Pinctada. Since there is not much work on bivalves identification in the Persian Gulf, larger sampling and more research is needed to investigate mollusc diversity in this area.
期刊介绍:
1- Living various species (contains animals and vegetal species) in various aquatic ecosystems.
2- Health and diseases of aquatic species.
3- Determining the stocks and specific time and location for catching and reliable exploitation for sustainable development.
4- Methods of propagation and culture of high value aquatic resources.
5- Aquatic stock assessment and the methods of restocking the high value species and suggestion for rate, areas and the time for releasing fish and other aquatic organisms fries.
6- Pollutant agents and their effects to the environments of aquatic species.
7- Feed and feeding in aquatic organisms.
8- Fish processing and producing new products.
9- The economic and social aspects of fisheries.