等温扩增在环境生物安全监测中的应用

IF 3.8 2区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Neobiota Pub Date : 2023-02-24 DOI:10.3897/neobiota.82.97998
Nathan Deliveyne, Jennifer M. Young, J. Austin, P. Cassey
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引用次数: 1

摘要

与跨国野生动物贸易相关的环境生物安全风险包括生物多样性的丧失、对公共健康的威胁以及外来入侵物种的扩散。为了协助执法机构识别贸易链路径中有意(贩运)或无意(偷渡)携带的物种,需要快速的法医技术,以便在无法进行物理识别时能够从DNA样本中检测到这些物种。环介导等温扩增(LAMP)是一种新兴技术,最近在生物安全和法医科学中得到了应用,有可能成为一种基于现场的检测工具。在这里,我们概述了将LAMP应用于环境生物安全的当前研究,包括野生动物观赏部位、消费品的识别,以及入侵物种监测和生物安全检测。我们讨论了LAMP目前应用于各种野生动物贸易场景和生物安全检查站监测的范围,强调了这些应用的特异性、敏感性和稳健性,并审查了LAMP在生物安全检查站快速现场检测中的潜在效用。根据我们对文献的评估,我们建议对LAMP进行更广泛的兴趣、研究和投资,将其作为一种适用于各种环境生物安全场景的合适的基于现场的物种检测方法。
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Shining a LAMP on the applications of isothermal amplification for monitoring environmental biosecurity
Environmental biosecurity risks associated with the transnational wildlife trade include the loss of biodiversity, threats to public health, and the proliferation of invasive alien species. To assist enforcement agencies in identifying species either intentionally (trafficked) or unintentionally (stowaway) entrained in the trade-chain pathway, rapid forensic techniques are needed to enable their detection from DNA samples when physical identification is not possible. Loop Mediated Isothermal Amplification (LAMP) is an emerging technique, with recent applications in biosecurity and forensic sciences, which has potential to function as a field-based detection tool. Here we provide an overview of current research that applies LAMP to environmental biosecurity, including identification of ornamental wildlife parts, consumer products, and invasive species monitoring and biosecurity detection. We discuss the current scope of LAMP as applied to various wildlife trade scenarios and biosecurity checkpoint monitoring, highlight the specificity, sensitivity, and robustness for these applications, and review the potential utility of LAMP for rapid field-based detection at biosecurity checkpoints. Based on our assessment of the literature we recommend broader interest, research uptake, and investment in LAMP as an appropriate field-based species detection method for a wide range of environmental biosecurity scenarios.
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来源期刊
Neobiota
Neobiota Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
8.10
自引率
7.80%
发文量
0
审稿时长
6 weeks
期刊介绍: NeoBiota is a peer-reviewed, open-access, rapid online journal launched to accelerate research on alien species and biological invasions: aquatic and terrestrial, animals, plants, fungi and micro-organisms. The journal NeoBiota is a continuation of the former NEOBIOTA publication series; for volumes 1-8 see http://www.oekosys.tu-berlin.de/menue/neobiota All articles are published immediately upon editorial approval. All published papers can be freely copied, downloaded, printed and distributed at no charge for the reader. Authors are thus encouraged to post the pdf files of published papers on their homepages or elsewhere to expedite distribution. There is no charge for color.
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