晶体学分析揭示了苯氧酸与人血清白蛋白高亲和力结合的结构基础

IF 2.222 Q3 Biochemistry, Genetics and Molecular Biology BMC Structural Biology Pub Date : 2011-04-18 DOI:10.1186/1472-6807-11-18
Ali J Ryan, Chun-wa Chung, Stephen Curry
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引用次数: 32

摘要

苯氧酸是一种碘化放射造影剂,由于其在体内的半衰期特别长,部分原因是其与人血清白蛋白(HSA)的高亲和力结合,因此已退出临床使用。它被碘化苯基环3位的氨基而不是羟基取代,因此与白蛋白结合的亲和力较低,从体内排出的速度更快。为了了解苯氧酸是如何与白蛋白紧密结合的,我们想要研究它与HSA相互作用的结构基础。我们测定了在2.75℃时与邻苯二甲酸配合物的HSA共晶结构。分辨率显示了总共四个结合位点,其中两个-在药物上的蛋白位点1和2 -可能在临床剂量下被占用。吩氧酸的高亲和力结合发生在药物位点1。结构表明化合物上的极性和极性基团参与了其与药物位点1的相互作用。特别是,3-羟基与Tyr 150和Arg 257的侧链形成3个氢键。与药物位点2的结合模式相似,除了化合物的苯基环上的羟基没有结合伙伴。hsa -邻苯氧酸结构表明,与药物位点1的高亲和力结合可能是由于化合物的广泛脱溶,再加上结合袋能够为其极性基团提供全套盐桥或氢键伙伴。与这一解释一致的是,该结构还表明,由于氨基取代了3-羟基,消除了与Arg 257之间的氢键,所以iopanoic酸的亲和力较低。这一发现强调了极性相互作用在与白蛋白高亲和力结合中的重要性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Crystallographic analysis reveals the structural basis of the high-affinity binding of iophenoxic acid to human serum albumin

Iophenoxic acid is an iodinated radiocontrast agent that was withdrawn from clinical use because of its exceptionally long half-life in the body, which was due in part to its high-affinity binding to human serum albumin (HSA). It was replaced by Iopanoic acid, which has an amino rather than a hydroxyl group at position 3 on the iodinated benzyl ring and, as a result, binds to albumin with lower affinity and is excreted more rapidly from the body. To understand how iophenoxic acid binds so tightly to albumin, we wanted to examine the structural basis of its interaction with HSA.

We have determined the co-crystal structure of HSA in complex with iophenoxic acid at 2.75 ? resolution, revealing a total of four binding sites, two of which - in drugs sites 1 and 2 on the protein - are likely to be occupied at clinical doses. High-affinity binding of iophenoxic acid occurs at drug site 1. The structure reveals that polar and apolar groups on the compound are involved in its interactions with drug site 1. In particular, the 3-hydroxyl group makes three hydrogen bonds with the side-chains of Tyr 150 and Arg 257. The mode of binding to drug site 2 is similar except for the absence of a binding partner for the hydroxyl group on the benzyl ring of the compound.

The HSA-iophenoxic acid structure indicates that high-affinity binding to drug site 1 is likely to be due to extensive desolvation of the compound, coupled with the ability of the binding pocket to provide a full set of salt-bridging or hydrogen bonding partners for its polar groups. Consistent with this interpretation, the structure also suggests that the lower-affinity binding of iopanoic acid arises because replacement of the 3-hydroxyl by an amino group eliminates hydrogen bonding to Arg 257. This finding underscores the importance of polar interactions in high-affinity binding to albumin.

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来源期刊
BMC Structural Biology
BMC Structural Biology 生物-生物物理
CiteScore
3.60
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0
期刊介绍: BMC Structural Biology is an open access, peer-reviewed journal that considers articles on investigations into the structure of biological macromolecules, including solving structures, structural and functional analyses, and computational modeling.
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