TWIST1 R154P点突变后TWIST1/E12复合体二聚化的不稳定性:一种计算机方法

IF 2.222 Q3 Biochemistry, Genetics and Molecular Biology BMC Structural Biology Pub Date : 2017-05-18 DOI:10.1186/s12900-017-0076-x
Charlotte Bouard, Raphael Terreux, Agnès Tissier, Laurent Jacqueroud, Arnaud Vigneron, Stéphane Ansieau, Alain Puisieux, Léa Payen
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引用次数: 4

摘要

bHLH转录因子TWIST1在胚胎发育和肿瘤发生中起关键作用。一些TWIST1基因的功能缺失突变已被证明可导致常染色体显性颅缝闭锁,即saethree - chotzen综合征(SCS)。尽管许多TWIST1突变的功能影响已被实验报道,但对其功能丧失的分子机制知之甚少。在之前的研究中,我们强调了硅分子动力学(MD)模拟在破译TWIST1残基分子功能方面的预测价值。在这里,由于精氨酸154氨基酸被甘氨酸残基(R154G)取代是SCS表型的原因,而精氨酸154被脯氨酸取代实验上降低了TWIST1的二聚化能力,我们使用MD方法研究了这种点突变的分子影响。与野生型TE复合物相比,MD模拟显示突变的R154P TWIST1/E12二聚体在二聚化过程中α-螺旋的稳定性明显下降,这一点在体外免疫分析中得到了进一步证实。我们的研究表明,MD模拟为与SCS TWIST1突变相关的功能丧失提供了结构性解释,并证明了这些MD模拟的预测价值。这种计算机方法可用于确定可靠的药效团位点,从而导致对接方法的应用,以确定TWIST1复合物的特异性抑制剂。
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Destabilization of the TWIST1/E12 complex dimerization following the R154P point-mutation of TWIST1: an in silico approach

The bHLH transcription factor TWIST1 plays a key role in the embryonic development and in tumorigenesis. Some loss-of-function mutations of the TWIST1 gene have been shown to cause an autosomal dominant craniosynostosis, known as the Saethre-Chotzen syndrome (SCS). Although the functional impacts of many TWIST1 mutations have been experimentally reported, little is known on the molecular mechanisms underlying their loss-of-function. In a previous study, we highlighted the predictive value of in silico molecular dynamics (MD) simulations in deciphering the molecular function of TWIST1 residues.

Here, since the substitution of the arginine 154 amino acid by a glycine residue (R154G) is responsible for the SCS phenotype and the substitution of arginine 154 by a proline experimentally decreases the dimerizing ability of TWIST1, we investigated the molecular impact of this point mutation using MD approaches. Consistently, MD simulations highlighted a clear decrease in the stability of the α-helix during the dimerization of the mutated R154P TWIST1/E12 dimer compared to the wild-type TE complex, which was further confirmed in vitro using immunoassays.

Our study demonstrates that MD simulations provide a structural explanation for the loss-of-function associated with the SCS TWIST1 mutation and provides a proof of concept of the predictive value of these MD simulations. This in silico methodology could be used to determine reliable pharmacophore sites, leading to the application of docking approaches in order to identify specific inhibitors of TWIST1 complexes.

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来源期刊
BMC Structural Biology
BMC Structural Biology 生物-生物物理
CiteScore
3.60
自引率
0.00%
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0
期刊介绍: BMC Structural Biology is an open access, peer-reviewed journal that considers articles on investigations into the structure of biological macromolecules, including solving structures, structural and functional analyses, and computational modeling.
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