聚合酶链反应(PCR) 16s rRNA扩增法分离鉴定大白菜废弃物中乳酸菌

A. Junitasari, T. D. Rosahdi, Yuni Siti Lestari
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引用次数: 0

摘要

废物是从人类和自然活动来源处置的尚未具有经济价值的材料。从物理上讲,蔬菜垃圾因其高含水量而易腐烂,特别是白菜垃圾。本研究的目的是从大白菜中分离鉴定乳酸菌。对从大白菜中分离得到的乳酸菌进行了分离。然后用聚合酶链反应(PCR)仪扩增。从芥菜1号、芥菜2号和芥菜3号中分离的细菌染色体DNA扩增结果显示DNA条带大小为±1200bp,因此可以得出结论,在芥菜1号、芥菜2号和芥菜3号分离物中扩增16s rRNA基因片段的过程是成功的。16s rRNA碱基序列分析结果表明,芥菜1分离物与芽孢杆菌的相似度为84.65%,芥菜2分离物与未培养细菌克隆的相似度为84.09%,芥菜3分离物与环境16s rDNA序列的相似度为85.42%。
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Isolation and Identification of Lactic Acid Bacteria form Chinese Cabbage Waste by 16s rRNA Amplification using The Polymerase Chain Reaction (PCR) Method
Waste is material that is disposed of from sources of human and natural activities that do not yet have economic value. Physically, vegetable waste is perishable due to its high-water content, especially Chinese Cabbage waste. The purpose of this study was the isolation and identification of lactic acid bacteria from Chinese Cabbage waste. Isolation was carried out to obtain isolates of lactic acid bacteria from Chinese Cabbage waste. Then it was amplified using a Polymerase Chain Reaction (PCR) instrument. The results of chromosomal DNA amplification of bacterial isolates from mustard 1, mustard 2 and mustard 3 waste showed DNA bands with a size of ± 1200 bp, so it can be concluded that the process of amplification of the 16s rRNA gene fragment in mustard 1, mustard 2 and mustard 3 isolates was successful. The results of the 16s rRNA base sequence analysis showed that the mustard 1 isolate had a similarity index of 84.65% with Bacillus sp, the gene for the mustard 2 isolate had a similarity index of 84.09% with the Uncultured bacterium clone, and the mustard 3 isolate gene had a similarity index of 85.42% with Environmental 16s rDNA sequence.
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来源期刊
CiteScore
0.80
自引率
0.00%
发文量
15
审稿时长
24 weeks
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