用于细胞术数据分析的贝叶斯混合模型

IF 4.4 2区 数学 Q1 STATISTICS & PROBABILITY Wiley Interdisciplinary Reviews-Computational Statistics Pub Date : 2020-10-16 DOI:10.1002/wics.1535
Lin Lin, B. Hejblum
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引用次数: 1

摘要

贝叶斯混合模型越来越多地用于基于模型的聚类和对所识别聚类的后续分析。因此,他们对分析细胞术数据特别感兴趣,因为无监督聚类和关联研究通常是科学问题的一部分。细胞测量数据是在多维空间中测量的大量定量数据,通常从几个维度到几十个维度,由于创新的高通量生物回声技术,这些数据不断增加。我们介绍了几种最新的参数和非参数贝叶斯混合建模方法,并描述了这些模型在不同研究背景下用于细胞术数据分析的优势和局限性。我们还认识到当前使用贝叶斯混合模型分析细胞术数据的计算挑战,并提请注意用于估计大型贝叶斯混合模型的先进数值算法的最新发展,我们认为这有可能使贝叶斯混合模型更适用于更高维的新型单细胞数据。
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Bayesian mixture models for cytometry data analysis
Bayesian mixture models are increasingly used for model‐based clustering and the follow‐up analysis on the clusters identified. As such, they are of particular interest for analyzing cytometry data where unsupervised clustering and association studies are often part of the scientific questions. Cytometry data are large quantitative data measured in a multidimensional space that typically ranges from a few dimensions to several dozens, and which keeps increasing due to innovative high‐throughput biotechonologies. We present several recent parametric and nonparametric Bayesian mixture modeling approaches, and describe advantages and limitations of these models under different research context for cytometry data analysis. We also acknowledge current computational challenges associated with the use of Bayesian mixture models for analyzing cytometry data, and we draw attention to recent developments in advanced numerical algorithms for estimating large Bayesian mixture models, which we believe have the potential to make Bayesian mixture model more applicable to new types of single‐cell data with higher dimensions.
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来源期刊
CiteScore
6.20
自引率
0.00%
发文量
31
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