计算视觉在甘薯根系生产遗传改良中的可行性

IF 0.7 4区 农林科学 Q4 HORTICULTURE Horticultura Brasileira Pub Date : 2022-12-01 DOI:10.1590/s0102-0536-20220405
A. C. G. Fernandes, N. R. Valadares, Clóvis Henrique O Rodrigues, R. A. Alves, L. L. M. Guedes, J. R. Magalhães, Rafael B da Silva, L. S. D. P. Gomes, A. M. Azevedo
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引用次数: 0

摘要

摘要红薯的改良是一项成本高昂的工作,因为为了选择最佳基因型,需要分析大量的特征,因此有必要采用与表型过程相关的新技术,如使用图像。本研究的目的是通过图像的计算分析,开发一种以半同胞甘薯后代的遗传改良为目标的根系生产表型分析方法,并将其性能与传统的评估方法进行比较。对16个具有4个重复的随机区组设计的半同胞甘薯家系进行了评估。在植物水平上,评估每根的重量和根的总数。这些图像是在一个由mdf制成的“工作室”中,在人工照明下,用佳能PowerShotSX400 IS数码相机拍摄的。使用R软件进行评估,其中拟合二次多项式回归模型来预测根重(以克为单位),并获得遗传值和预期增益。可以在植物和小区水平上预测根重,从而在预测的重量和观测的重量之间获得高的决定系数。计算机视觉可以预测根重,保持基因型排名,从而保持预期收益与选择之间的相似性。因此,图像的使用是红薯遗传改良计划的有效工具,有助于作物表型分析过程。
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Feasibility of computational vision in the genetic improvement of sweet potato root production
ABSTRACT The improvement of sweet potato is a costly job due to the large number of characteristics to be analyzed for the selection of the best genotypes, making it necessary to adopt new technologies, such as the use of images, associated with the phenotyping process. The objective of this research was to develop a methodology for the phenotyping of the root production aiming genetic improvement of half-sib sweet potato progenies through computational analysis of images and to compare its performance to the traditional methodology of evaluation. Sixteen half-sib sweet potato families in a randomized block design with 4 replications were evaluated. At plant level, the weight per root and the total number of roots were evaluated. The images were acquired in a “studio” made of mdf with a digital camera model Canon PowerShotSX400 IS, under artificial lighting. The evaluations were carried out using the R software, where a second-degree polynomial regression model was fitted to predict the root weight (in grams) and the genetic values and expected gains were obtained. It was possible to predict the root weight at plant and plot level, obtaining high coefficients of determination between the predicted and observed weight. Computer vision allowed the prediction of root weight, maintaining the genotype ranking and consequently the similarity between the expected gains with the selection. Thus, the use of images is an efficient tool for sweet potato genetic improvement programs, assisting in the crop phenotyping process.
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来源期刊
Horticultura Brasileira
Horticultura Brasileira 农林科学-园艺
CiteScore
1.40
自引率
28.60%
发文量
45
审稿时长
4-8 weeks
期刊介绍: The journal Horticultura Brasileira, a quarterly journal, is the Official Publication of the Sociedade de Olericultura do Brasil. Its abbreviated title is Hortic. bras., and it should be used in bibliographies, footnotes, references and bibliographic strips.
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