NNK诱导的小鼠肺增生/异型增生和腺瘤的蛋白质组学分析发现了多种蛋白质作为早期检测的潜在生物标志物

Q4 Biochemistry, Genetics and Molecular Biology EuPA Open Proteomics Pub Date : 2015-12-01 DOI:10.1016/j.euprot.2015.07.015
Arunangshu Das , James D. Bortner Jr. , Cesar Aliaga , Timothy Cooper , Anne Stanley , Bruce A. Stanley , Chandra P. Belani , Karam El-Bayoumy
{"title":"NNK诱导的小鼠肺增生/异型增生和腺瘤的蛋白质组学分析发现了多种蛋白质作为早期检测的潜在生物标志物","authors":"Arunangshu Das ,&nbsp;James D. Bortner Jr. ,&nbsp;Cesar Aliaga ,&nbsp;Timothy Cooper ,&nbsp;Anne Stanley ,&nbsp;Bruce A. Stanley ,&nbsp;Chandra P. Belani ,&nbsp;Karam El-Bayoumy","doi":"10.1016/j.euprot.2015.07.015","DOIUrl":null,"url":null,"abstract":"<div><p>We used a proteomics approach (iTRAQ) to identify differentially expressed lung proteins during early stages of the tobacco carcinogen, NNK-induced lung tumorigenesis (hyperplasia/atypia, 4–10 weeks and adenoma, 25 week) prior to the detection of adenocarcinoma in A/J mice. We identified 790 proteins at week 4 and 710 proteins at weeks 10 and 25 with &gt;95% confidence and a Local False Discovery Rate estimation less than 5%. We have demonstrated that NNK altered multiple protein (e.g., Carbonyl Reductase, Annexin A5/6, Selenbp1, Hmgb1 and Hsp90b1) expressions in early lesions which can be used as potential biomarkers for early detection of lung cancer.</p></div>","PeriodicalId":38260,"journal":{"name":"EuPA Open Proteomics","volume":"9 ","pages":"Pages 23-33"},"PeriodicalIF":0.0000,"publicationDate":"2015-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.euprot.2015.07.015","citationCount":"2","resultStr":"{\"title\":\"Proteomic profiling of hyperplasia/atypia and adenoma-induced by NNK in mouse lung identified multiple proteins as potential biomarkers for early detection\",\"authors\":\"Arunangshu Das ,&nbsp;James D. Bortner Jr. ,&nbsp;Cesar Aliaga ,&nbsp;Timothy Cooper ,&nbsp;Anne Stanley ,&nbsp;Bruce A. Stanley ,&nbsp;Chandra P. Belani ,&nbsp;Karam El-Bayoumy\",\"doi\":\"10.1016/j.euprot.2015.07.015\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>We used a proteomics approach (iTRAQ) to identify differentially expressed lung proteins during early stages of the tobacco carcinogen, NNK-induced lung tumorigenesis (hyperplasia/atypia, 4–10 weeks and adenoma, 25 week) prior to the detection of adenocarcinoma in A/J mice. We identified 790 proteins at week 4 and 710 proteins at weeks 10 and 25 with &gt;95% confidence and a Local False Discovery Rate estimation less than 5%. We have demonstrated that NNK altered multiple protein (e.g., Carbonyl Reductase, Annexin A5/6, Selenbp1, Hmgb1 and Hsp90b1) expressions in early lesions which can be used as potential biomarkers for early detection of lung cancer.</p></div>\",\"PeriodicalId\":38260,\"journal\":{\"name\":\"EuPA Open Proteomics\",\"volume\":\"9 \",\"pages\":\"Pages 23-33\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2015-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/j.euprot.2015.07.015\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"EuPA Open Proteomics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2212968515300179\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"EuPA Open Proteomics","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2212968515300179","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 2

摘要

我们使用蛋白质组学方法(iTRAQ)在a/ J小鼠中检测到腺癌之前,在烟草致癌物nnk诱导的肺肿瘤发生的早期阶段(增生/异型,4-10周和腺瘤,25周)鉴定肺蛋白的差异表达。我们在第4周鉴定了790种蛋白质,在第10周和第25周鉴定了710种蛋白质,置信度为95%,局部错误发现率估计小于5%。我们已经证明,NNK改变了多种蛋白(如羰基还原酶、膜联蛋白A5/6、硒bp1、Hmgb1和Hsp90b1)在早期病变中的表达,这些蛋白可以作为肺癌早期检测的潜在生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Proteomic profiling of hyperplasia/atypia and adenoma-induced by NNK in mouse lung identified multiple proteins as potential biomarkers for early detection

We used a proteomics approach (iTRAQ) to identify differentially expressed lung proteins during early stages of the tobacco carcinogen, NNK-induced lung tumorigenesis (hyperplasia/atypia, 4–10 weeks and adenoma, 25 week) prior to the detection of adenocarcinoma in A/J mice. We identified 790 proteins at week 4 and 710 proteins at weeks 10 and 25 with >95% confidence and a Local False Discovery Rate estimation less than 5%. We have demonstrated that NNK altered multiple protein (e.g., Carbonyl Reductase, Annexin A5/6, Selenbp1, Hmgb1 and Hsp90b1) expressions in early lesions which can be used as potential biomarkers for early detection of lung cancer.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
EuPA Open Proteomics
EuPA Open Proteomics Biochemistry, Genetics and Molecular Biology-Biochemistry
自引率
0.00%
发文量
0
审稿时长
103 days
期刊最新文献
Proceedings of the EuBIC-MS 2020 Developers’ Meeting Editorial: The next generation in (EuPA Open) Proteomics Aims & scope Proceedings of the EuBIC Winter School 2019 Introducing the YPIC challenge
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1