秘鲁丛林种群中27个STR Y染色体标记的分析

Carlos David Neyra-Rivera , Cristian Saul Robles Mamani , Edgardo Delgado Ramos , Margarita Rosa Eugenia Velasquez Reinoso , Bruce Budowle
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引用次数: 1

摘要

Y染色体特异性短串联重复序列(Y- str)标记存在于Y染色体的非重组部分,其遗传是父系的,在女性DNA中检测不到。这些特性使y - str在性侵犯、育儿和其他暴力犯罪等法医调查中成为有用的工具;同样,它们在家谱和进化研究中也很有用。该研究的目的是扩大Y性染色体单倍型按地区或国家分布的科学证据。由于法医和群体遗传学中经常使用的Y-STR多态性数量较少,秘鲁人群的类似研究很少。材料与方法:对来自秘鲁丛林的141份DNA样本进行了分析,其中104份来自伊基托斯地区(洛雷托),29份来自Awajun地区(亚马逊),8份来自Tambopata地区(马德雷·德迪奥斯)。使用Yfiler™Plus PCR扩增试剂盒对27个str进行直接PCR处理,扩增产物在Applied Biosystem™3500XL遗传分析仪上进行毛细管电泳分析,获得的数据导入GeneMapper®ID-X v1.5软件生成遗传谱。根据所得结果,进行了统计分析和种群结构分析。结果:在141份样本中,观察到106种独特的单倍型。各Y-STR标记的基因多样性范围为0.317 ~ 0.919。总样本的单倍型多样性为0.9906。该研究支持该种群的Y-STR单倍型在分析的种群中具有高度多态性,因此在人类鉴定的法医研究以及在调查拉丁美洲群体或个体时的种群遗传学研究中非常有用。
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Análisis de 27 marcadores STR del cromosoma Y en poblaciones de la selva del Perú

Y-chromosome-specific short tandem repeat (Y-STR) markers reside on the non-recombinant portion of the Y chromosome, their inheritance is paternal, they are not detectable in female DNA. These properties make Y-STRs a useful tool in forensic investigations such as sexual assault, parenting, and other violent crimes; likewise they are also useful in genealogical and evolutionary studies. The objective of the research is to expand the scientific evidence of the distribution by region or country of the Y sex chromosome haplotypes. Similar studies in Peruvian populations are scarce due to the smaller number of Y-STR polymorphisms frequently used in Forensic and Population Genetics.

Material and method: In the investigation, 141 DNA samples from the jungle of Peru were analyzed, of which comprised of 104 samples from Iquitos region (Loreto), 29 samples from Awajun (Amazonas) and 8 samples from Tambopata (Madre de Dios). The samples were processed using direct PCR with the Yfiler™ Plus PCR Amplification kit for 27 STRs, the amplified products were analyzed by capillary electrophoresis on the Applied Biosystem™ 3500XL Genetic Analyzer, and the data obtained was imported into the GeneMapper® ID-X v1.5 software to generate the genetic profiles. With the results obtained, the statistical analysis and the population structure were carried out.

Results: Of the 141 samples, 106 unique haplotypes were observed. Gene diversities for each Y-STR marker ranged from 0.317 to 0.919. The haplotype diversity for the total sample was 0.9906. This study supports that the Y-STR haplotypes in this population are highly polymorphic in the analyzed population and, therefore, are very useful in forensic studies of human identification, as well as in population genetics when investigating groups or individuals from Latin America.

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来源期刊
Revista Espanola de Medicina Legal
Revista Espanola de Medicina Legal Medicine-Pathology and Forensic Medicine
CiteScore
1.90
自引率
0.00%
发文量
27
审稿时长
41 days
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