{"title":"brainR:交互式三维和四维图像的高分辨率神经图像数据","authors":"J. Muschelli, E. Sweeney, C. Crainiceanu","doi":"10.32614/RJ-2014-004","DOIUrl":null,"url":null,"abstract":"We provide software tools for displaying and publishing interactive 3-dimensional (3D) and 4-dimensional (4D) figures to html webpages, with examples of high-resolution brain imaging. Our framework is based in the R statistical software using the rgl package, a 3D graphics library. We build on this package to allow manipulation of figures including rotation and translation, zooming, coloring of brain substructures, adjusting transparency levels, and addition/or removal of brain structures. The need for better visualization tools of ultra high dimensional data is ever present; we are providing a clean, simple, web-based option. We also provide a package (brainR) for users to readily implement these tools.","PeriodicalId":51285,"journal":{"name":"R Journal","volume":"6 1 1","pages":"41-48"},"PeriodicalIF":2.3000,"publicationDate":"2014-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"11","resultStr":"{\"title\":\"brainR: Interactive 3 and 4D Images of High Resolution Neuroimage Data\",\"authors\":\"J. Muschelli, E. Sweeney, C. Crainiceanu\",\"doi\":\"10.32614/RJ-2014-004\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"We provide software tools for displaying and publishing interactive 3-dimensional (3D) and 4-dimensional (4D) figures to html webpages, with examples of high-resolution brain imaging. Our framework is based in the R statistical software using the rgl package, a 3D graphics library. We build on this package to allow manipulation of figures including rotation and translation, zooming, coloring of brain substructures, adjusting transparency levels, and addition/or removal of brain structures. The need for better visualization tools of ultra high dimensional data is ever present; we are providing a clean, simple, web-based option. We also provide a package (brainR) for users to readily implement these tools.\",\"PeriodicalId\":51285,\"journal\":{\"name\":\"R Journal\",\"volume\":\"6 1 1\",\"pages\":\"41-48\"},\"PeriodicalIF\":2.3000,\"publicationDate\":\"2014-06-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"11\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"R Journal\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://doi.org/10.32614/RJ-2014-004\",\"RegionNum\":4,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"R Journal","FirstCategoryId":"94","ListUrlMain":"https://doi.org/10.32614/RJ-2014-004","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
brainR: Interactive 3 and 4D Images of High Resolution Neuroimage Data
We provide software tools for displaying and publishing interactive 3-dimensional (3D) and 4-dimensional (4D) figures to html webpages, with examples of high-resolution brain imaging. Our framework is based in the R statistical software using the rgl package, a 3D graphics library. We build on this package to allow manipulation of figures including rotation and translation, zooming, coloring of brain substructures, adjusting transparency levels, and addition/or removal of brain structures. The need for better visualization tools of ultra high dimensional data is ever present; we are providing a clean, simple, web-based option. We also provide a package (brainR) for users to readily implement these tools.
R JournalCOMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS-STATISTICS & PROBABILITY
CiteScore
2.70
自引率
0.00%
发文量
40
审稿时长
>12 weeks
期刊介绍：
The R Journal is the open access, refereed journal of the R project for statistical computing. It features short to medium length articles covering topics that should be of interest to users or developers of R.
The R Journal intends to reach a wide audience and have a thorough review process. Papers are expected to be reasonably short, clearly written, not too technical, and of course focused on R. Authors of refereed articles should take care to:
- put their contribution in context, in particular discuss related R functions or packages;
- explain the motivation for their contribution;
- provide code examples that are reproducible.
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