油藏宏基因组中一种耐热酯酶的发现与表征

A. Lewin, T. A. Strand, T. Haugen, G. Klinkenberg, H. Kotlar, S. Valla, F. Drabløs, A. Wentzel
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引用次数: 9

摘要

为了鉴定新的耐热酯酶,利用基于序列和功能的筛选方法,对来自挪威大陆架海上油藏的宏基因组的综合序列数据库和克隆fosmid文库进行了筛选,以寻找候选酶。从两种方法中确定的几个候选物中,通过功能方法发现的一种酶被证实是一种新的酯酶,并进行了更深入的表征。该酶在大肠杆菌中成功过量产生,并显示出高达90°C的耐热性,在短链酯底物上具有最高的酯酶活性,并且对溶剂和金属离子具有耐受性。该热稳定酶仅通过油藏宏基因组的功能筛选发现,这一事实说明了该方法作为纯粹基于序列的筛选的补充的重要性,在基于序列的筛选中,候选酶未被检测到。此外,这个例子表明,深层地下油藏宏基因组作为新型热稳定性酶的来源具有巨大的潜力,具有潜在的工业应用价值。
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Discovery and Characterization of a Thermostable Esterase from an Oil Reservoir Metagenome
With the aim of identifying novel thermostable esterases, comprehensive sequence databases and cloned fosmid libraries of metagenomes derived from an offshore oil reservoir on the Norwegian Continental Shelf were screened for enzyme candidates using both sequence-and function-based screening. From several candidates identified in both approaches, one enzyme discovered by the functional approach was verified as a novel esterase and subjected to a deeper characterization. The enzyme was successfully over-produced in Escherichia coli and was shown to be thermostable up to 90°C, with the highest esterase activity on short-chain ester substrates and with tolerance to solvents and metal ions. The fact that the thermostable enzyme was solely found by functional screening of the oil reservoir metagenomes illustrates the importance of this approach as a complement to purely sequence-based screening, in which the enzyme candidate was not detected. In addition, this example indicates the large potential of deep-sub-surface oil reservoir metagenomes as a source of novel, thermostable enzymes of potential relevance for industrial applications.
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