利用大量临床笔记发现相关临床概念

IF 2.3 Q3 ENGINEERING, BIOMEDICAL Biomedical Engineering and Computational Biology Pub Date : 2016-01-01 DOI:10.4137/BECB.S36155
Kavita A. Ganesan, S. Lloyd, V. Sarkar
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引用次数: 6

摘要

查找高度相关的临床概念的能力对于许多应用程序至关重要,例如假设生成、医学文献搜索的查询扩展、搜索结果过滤、ICD-10代码过滤和许多其他应用程序。虽然人工构建的医学术语(如SNOMED CT)可以显示某些相关概念,但这些术语是不够的,因为它们依赖于几个主题专家的专业知识,使得术语管理过程容易受到地理和语言偏见的影响。此外,这些术语也没有提供可量化的证据来证明这些概念之间的相关性。在这项工作中,我们探索了一种无监督的图形方法,通过利用大量临床笔记中的体积来挖掘相关概念。我们的评估表明,我们能够使用数据驱动的方法来发现各种搜索词的高度相关概念,包括药物、症状和疾病。
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Discovering Related Clinical Concepts Using Large Amounts of Clinical Notes
The ability to find highly related clinical concepts is essential for many applications such as for hypothesis generation, query expansion for medical literature search, search results filtering, ICD-10 code filtering and many other applications. While manually constructed medical terminologies such as SNOMED CT can surface certain related concepts, these terminologies are inadequate as they depend on expertise of several subject matter experts making the terminology curation process open to geographic and language bias. In addition, these terminologies also provide no quantifiable evidence on how related the concepts are. In this work, we explore an unsupervised graphical approach to mine related concepts by leveraging the volume within large amounts of clinical notes. Our evaluation shows that we are able to use a data driven approach to discovering highly related concepts for various search terms including medications, symptoms and diseases.
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