转录组测序揭示了一组由丁酸盐诱导的组蛋白修饰激活的独特基因

Congjun Li, Robert W. Li, R. Baldwin, L. Blomberg, Sitao Wu, Weizhong Li
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引用次数: 20

摘要

丁酸盐是一种营养元素,作为组蛋白去乙酰化酶抑制剂具有很强的表观遗传调控活性。利用RNA测序技术对牛上皮细胞的差异表达基因进行分析,发现了一组只有经过丁酸盐处理才能激活的独特基因。利用Ingenuity Pathways analysis对功能类别、途径和集成网络进行的补充生物信息学分析表明,丁酸盐处理激活的这些基因与主要的细胞功能有关,包括细胞形态改变、细胞周期阻滞和细胞凋亡。我们的研究结果提供了对丁酸盐诱导的转录组变化的见解,并将加速我们对表观基因组调控的分子基础的认识。
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Transcriptomic Sequencing Reveals a Set of Unique Genes Activated by Butyrate-Induced Histone Modification
Butyrate is a nutritional element with strong epigenetic regulatory activity as a histone deacetylase inhibitor. Based on the analysis of differentially expressed genes in the bovine epithelial cells using RNA sequencing technology, a set of unique genes that are activated only after butyrate treatment were revealed. A complementary bioinformatics analysis of the functional category, pathway, and integrated network, using Ingenuity Pathways Analysis, indicated that these genes activated by butyrate treatment are related to major cellular functions, including cell morphological changes, cell cycle arrest, and apoptosis. Our results offered insight into the butyrate-induced transcriptomic changes and will accelerate our discerning of the molecular fundamentals of epigenomic regulation.
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