难处理似然贝叶斯推理的Barker算法

F. Gonccalves, K. Latuszy'nski, G. Roberts
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引用次数: 8

摘要

在这篇说明性的论文中,我们抽象并描述了一个简单的MCMC方案,用于从难以处理的目标密度中采样。该方法已在Gon\c{c}alves等人(2017a)中在跳跃扩散的特定背景下引入,并且基于Barker算法与简单的伯努利工厂类型方案配对,即所谓的2硬币算法。在许多情况下,它可以替代标准的Metropolis-Hastings伪边际法来模拟难以处理的目标密度。虽然Barker’s的效率比Metropolis-Hastings略低,但我们的方法的关键优势在于,由于接受/拒绝概率的特殊形式,它允许实现“边缘Barker’s”而不是扩展状态空间的伪边缘Metropolis-Hastings。我们将在离散观察到的Wright-Fisher扩散族的贝叶斯推理的背景下说明我们的方法。
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Barker's algorithm for Bayesian inference with intractable likelihoods
In this expository paper we abstract and describe a simple MCMC scheme for sampling from intractable target densities. The approach has been introduced in Gon\c{c}alves et al. (2017a) in the specific context of jump-diffusions, and is based on the Barker's algorithm paired with a simple Bernoulli factory type scheme, the so called 2-coin algorithm. In many settings it is an alternative to standard Metropolis-Hastings pseudo-marginal method for simulating from intractable target densities. Although Barker's is well-known to be slightly less efficient than Metropolis-Hastings, the key advantage of our approach is that it allows to implement the "marginal Barker's" instead of the extended state space pseudo-marginal Metropolis-Hastings, owing to the special form of the accept/reject probability. We shall illustrate our methodology in the context of Bayesian inference for discretely observed Wright-Fisher family of diffusions.
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