Shasha Wei, J. Peng, Zhidan Chen, Weijiang Sun, Lin Lin, Renquan Wu
{"title":"基于ISSR分子标记的幽溪苦茶资源遗传多样性分析","authors":"Shasha Wei, J. Peng, Zhidan Chen, Weijiang Sun, Lin Lin, Renquan Wu","doi":"10.5376/jtsr.2020.10.0003","DOIUrl":null,"url":null,"abstract":"In this study, we analyzed the genetic diversity by using ISSR markers in four populations with 37 DNA samples of Youxi Kucha. In total, 66 alleles were amplified using 8 ISSR primers. A total of 66 bands were detected, of which 63 bands were polymorphic with a polymorphic proportion of 95.24 %. At the population level, the average PPL of the four populations of Youxi Kucha is 76.19 %, and the average values of Nei's gene diversity index (H) and Shannon diversity index (I) are 0.204 5 and 0.367 7 respectively. At the species levelm the H and I are 0.305 1 and 0.465 0 respectively respectively. Youxi Kucha maintained a relatively high genetic variability at the population level and species level bothly. The genetic differentiation within the population was significantly higher than that between populations,but the genetic differentiation between the populations has also reached higher level (Φst = 0.17> 0.15), the differentiation is extremely significant (P <0.01). A mantel test indicated there was no significant relationship between genetic distance and geographic distance among the populations studied. Correlation analysis shows that the diversity index has little relationship with altitude. This study carried out the molecular identification of the germplasm resources of Youxi bitter tea accurately, which can provide a theoretical basis for the protection of Youxi bitter tea and the breeding of improved tea varieties.","PeriodicalId":17156,"journal":{"name":"茶叶科学","volume":"34 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genetic Diversity Analysis of Youxi Bitter Tea Resources Based on ISSR Molecular Markers\",\"authors\":\"Shasha Wei, J. Peng, Zhidan Chen, Weijiang Sun, Lin Lin, Renquan Wu\",\"doi\":\"10.5376/jtsr.2020.10.0003\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In this study, we analyzed the genetic diversity by using ISSR markers in four populations with 37 DNA samples of Youxi Kucha. In total, 66 alleles were amplified using 8 ISSR primers. A total of 66 bands were detected, of which 63 bands were polymorphic with a polymorphic proportion of 95.24 %. At the population level, the average PPL of the four populations of Youxi Kucha is 76.19 %, and the average values of Nei's gene diversity index (H) and Shannon diversity index (I) are 0.204 5 and 0.367 7 respectively. At the species levelm the H and I are 0.305 1 and 0.465 0 respectively respectively. Youxi Kucha maintained a relatively high genetic variability at the population level and species level bothly. The genetic differentiation within the population was significantly higher than that between populations,but the genetic differentiation between the populations has also reached higher level (Φst = 0.17> 0.15), the differentiation is extremely significant (P <0.01). A mantel test indicated there was no significant relationship between genetic distance and geographic distance among the populations studied. Correlation analysis shows that the diversity index has little relationship with altitude. This study carried out the molecular identification of the germplasm resources of Youxi bitter tea accurately, which can provide a theoretical basis for the protection of Youxi bitter tea and the breeding of improved tea varieties.\",\"PeriodicalId\":17156,\"journal\":{\"name\":\"茶叶科学\",\"volume\":\"34 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2020-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"茶叶科学\",\"FirstCategoryId\":\"1087\",\"ListUrlMain\":\"https://doi.org/10.5376/jtsr.2020.10.0003\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"茶叶科学","FirstCategoryId":"1087","ListUrlMain":"https://doi.org/10.5376/jtsr.2020.10.0003","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Genetic Diversity Analysis of Youxi Bitter Tea Resources Based on ISSR Molecular Markers
In this study, we analyzed the genetic diversity by using ISSR markers in four populations with 37 DNA samples of Youxi Kucha. In total, 66 alleles were amplified using 8 ISSR primers. A total of 66 bands were detected, of which 63 bands were polymorphic with a polymorphic proportion of 95.24 %. At the population level, the average PPL of the four populations of Youxi Kucha is 76.19 %, and the average values of Nei's gene diversity index (H) and Shannon diversity index (I) are 0.204 5 and 0.367 7 respectively. At the species levelm the H and I are 0.305 1 and 0.465 0 respectively respectively. Youxi Kucha maintained a relatively high genetic variability at the population level and species level bothly. The genetic differentiation within the population was significantly higher than that between populations,but the genetic differentiation between the populations has also reached higher level (Φst = 0.17> 0.15), the differentiation is extremely significant (P <0.01). A mantel test indicated there was no significant relationship between genetic distance and geographic distance among the populations studied. Correlation analysis shows that the diversity index has little relationship with altitude. This study carried out the molecular identification of the germplasm resources of Youxi bitter tea accurately, which can provide a theoretical basis for the protection of Youxi bitter tea and the breeding of improved tea varieties.
期刊介绍:
The Journal of Tea Science was established in August 1964, approved by the Publicity Department, CCCPC. Its title was inscribed by Zhu De, the chairman of CCCPC. It was discontinued during the Cultural Revolution in 1966, and it was reissued in August 1984, approved by the State Scientific and Technological Commission.Academicians Chen Zongmao and Liu Zhonghuaof the Chinese Academy of Engineering served as the directors of the editorial board. The Journal of Tea Science is managed by the China Association for Science and Technology,sponsored by the China Tea Science Society and the Tea Research Institute of the Chinese Academy of Agricultural Sciences, and edited and published by the editorial office of the Journal of Tea Science. It is the only one of Chinese core journals in the field of tea science that is included in the core library of the Chinese Science Citation Database.Its Domestic Unified Serial Number is CN 33-1115/S, its International Standard Serial Number is ISSN 1000-369X and its International publication name code is CODEN-CHKEF4. At present, the Journal of Tea Science is a bimonthly publication, published in the middle of the month, with a book size of 16.