人类腮腺单细胞分辨率的转录组图谱

M. Chen, W. Lin, J. Gan, W. Lu, M. Wang, X. Wang, J. Yi, Z. Zhao
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引用次数: 12

摘要

腮腺是口腔中最大的唾液腺,在食物的初始消化和润滑中起着重要的作用。腮腺分泌功能异常可导致龋齿和口腔黏膜炎症。近年来,单细胞RNA测序(scRNA-seq)被用于探索各种器官和组织中细胞的异质性和多样性。然而,在单细胞分辨率下,人类腮腺的转录谱尚未报道。在本研究中,我们利用10x Genomics平台构建了人腮腺细胞图谱。特征基因分析确定浆液腺泡细胞群在分泌消化酶和抗菌蛋白方面的生物学功能。通过对其他已发表的scRNA-seq数据集的比较分析,我们揭示了腮腺与其他消化腺的特异性和相似性。我们还通过整合全基因组关联研究和大量RNA-seq的结果,确定了人腮腺Sjögren综合征枢纽基因的细胞特异性表达,这突出了免疫细胞功能障碍在腮腺Sjögren综合征发病机制中的重要性。
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Transcriptomic Mapping of Human Parotid Gland at Single-Cell Resolution
As the largest salivary gland in oral cavity, the parotid gland plays an important role in initial digesting and lubricating food. The abnormal secretory function of the parotid gland can lead to dental caries and oral mucosal inflammation. In recent years, single-cell RNA sequencing (scRNA-seq) has been used to explore the heterogeneity and diversity of cells in various organs and tissues. However, the transcription profile of the human parotid gland at single-cell resolution has not been reported yet. In this study, we constructed the cell atlas of human parotid gland using the 10× Genomics platform. Characteristic gene analysis identified the biological functions of serous acinar cell populations in secreting digestive enzymes and antibacterial proteins. We revealed the specificity and similarity of the parotid gland compared to other digestive glands through comparative analyses of other published scRNA-seq data sets. We also identified the cell-specific expression of hub genes for Sjögren syndrome in the human parotid gland by integrating the results of genome-wide association studies and bulk RNA-seq, which highlighted the importance of immune cell dysfunction in parotid Sjögren syndrome pathogenesis.
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来源期刊
Indian Journal of Dental Research
Indian Journal of Dental Research Dentistry-Dentistry (all)
CiteScore
1.80
自引率
0.00%
发文量
80
审稿时长
38 weeks
期刊介绍: Indian Journal of Dental Research (IJDR) is the official publication of the Indian Society for Dental Research (ISDR), India section of the International Association for Dental Research (IADR), published quarterly. IJDR publishes scientific papers on well designed and controlled original research involving orodental sciences. Papers may also include reports on unusual and interesting case presentations and invited review papers on significant topics.
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