细菌纳米纤维素与长链脂肪酸的相互作用

V. R. Oviedo, Mariana Zancan Tonel, Walter Paixão de Souza Filho, L. F. Rodrigues Jr., Michelle Rorato Sagrillo, Solange Binotto Fagan, Liana Da Silva Fernandes
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摘要

慢性伤口是当代社会的一大挑战,因为它们会导致生活质量下降、截肢甚至死亡。由于对抗生素多重耐药菌的敏感性较高,慢性伤口可能发生感染和生物膜形成。在这种情况下,需要新型的伤口敷料生物材料进行治疗。因此,本研究的目的是评估BNC与tucumã油/黄油衍生脂肪酸的可能相互作用,因为该系统可能是一种有前途的伤口治疗生物材料。通过SIESTA程序,利用从头算模拟和密度泛函理论(DFT)对纤维素二糖(BNC基本单元)与四种脂肪酸之间的相互作用进行了评估。分子对接还用于研究所研究的脂肪酸可能释放对铜绿假单胞菌(革兰氏阴性菌)和金黄色葡萄球菌(革兰氏阳性菌)群体感应蛋白的影响。从头算模拟表明,纤维二糖与来源于tucumã油/黄油的脂肪酸之间的相互作用是由于脂质结构对纤维二糖的物理吸附(能量约为0.17-1.33 eV)。结果表明,质子化和去质子化脂肪酸对铜绿假单胞菌(LasI、LasA和rhr)和金黄色葡萄球菌(ArgA和ArgC)群体感应蛋白均具有较强的结合亲和力(∆G范围为4.2-8.2 kcal.mol-1),表明这些生物活性化合物可能在该体系中作为潜在的抗菌和/或抗生物膜剂。因此,从理论的角度来看,所提出的系统可能是生产慢性伤口敷料的一种有前途的生物原料。
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Bacterial nanocellulose and long-chain fatty acids interaction
Chronic wounds are a big challenge in contemporary society, as they lead to a decrease in life-quality, amputations and even death. Infections and biofilm formation might occur with chronic wounds, due to the higher susceptibility to antibiotic multi-resistant bacteria. In this situation, novel wound dressing biomaterials are needed for treatment. Thus, the aim of this research was to evaluate a possible BNC interaction with tucumã oil/butter-derived fatty acids, as this system could be a promising biomaterial for wound treating. The interaction between  cellobiose (BNC basic unit) and four fatty acids was evaluated by ab initio simulations and density functional theory (DFT), through SIESTA code. Molecular docking was also used to investigate the effect of a possible releasing of the studied fatty acids to the quorum-sensing proteins of Pseudomonas aeruginosa (gram-negative bacterium) and Staphylococcus aureus (gram-positive bacterium). According to ab initio simulations, the interaction between cellobiose and fatty acids derived from tucumã oil/butter was suggested due to physical adsorption (energy around 0.17-1.33 eV) of the lipidic structures into cellobiose. A great binding affinity (∆G ranging from 4.2-8.2 kcal.mol-1) was observed for both protonated and deprotonated fatty acids against P. aeruginosa (LasI, LasA and Rhlr) and S. aureus (ArgA and ArgC) quorum-sensing proteins, indicating that these bioactive compounds might act as potential antimicrobial and/or antibiofilm agents in the proposed system. Hence, from a theoretical viewpoint, the proposed system could be a promising raw biomaterial in the production of chronic wound dressings.
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