Marcos Jessé Abrahão Silva, Everaldina Cordeiro dos Santos, Y. C. Rodrigues, K. B. Batista Lima, Luana Nepomuceno Gondim Costa Lima
{"title":"麻风病toll样2基因多态性频率分析","authors":"Marcos Jessé Abrahão Silva, Everaldina Cordeiro dos Santos, Y. C. Rodrigues, K. B. Batista Lima, Luana Nepomuceno Gondim Costa Lima","doi":"10.9734/arrb/2022/v37i130472","DOIUrl":null,"url":null,"abstract":"Polymorphisms in genes that are responsible for encoding cytokines and receptors involved in the immune response, such as Toll-like Receptor (TLR) 2 in leprosy, are of great interest for immunogenetic studies. This work aimed to analyze the possible association of single nucleotide polymorphism (SNP), synonymous, rs3804100 of the TLR2 gene with leprosy. The study was conducted in Bacteriology and Mycology section of Evandro Chagas Institute, Brazil between August 2020 and July 2021.The scope of the study consisted of 122 subjects from cities of Goianésia, Rondon, Curionópolis, Altamira, Parauapebas and Redenção of the State of Pará, Brazil. Genotyping was performed by conventional PCR and sequencing in the ABI 3130 Genetic Analyzer (Applied Biosystems®) using primer nucleotides designed by the Primer3Plus program from the genomic region “Homo sapiens toll like receptor 2 (TLR2) transcript variant X6, mRNA”, deposited in GenBank with reference XM_011532216.2. The analyzes were performed based on Fisher's exact test. It was managed in accordance with Helsinki Declaration and the Brazilian National Health Council and with approval of the ethics committee at Evandro Chagas Institute, under opinion number: 3.950.570. No associations between gender and leprosy were possible (P> 0.05). However, associations were observed between age groups, which were significant between those over 46 years old (P=0.004) and the 2nd dose of BCG as a more protective agent between the groups analyzed (P=0.004). For the subjects with the typed genotypes, 68 contacts had T/T genotype and only 4 T/C genotypes, while in multibacillary (MB) group only 1 T/C genotype was found and none in paucibacillary (PB) (P> 0.05). We conclude that there is no association between the TLR2 SNP rs3804100 and leprosy in the Pará population, which still indicates the need for new immunogenetic studies with other genes involved in the immune response and a greater number of polymorphisms.","PeriodicalId":8230,"journal":{"name":"Annual research & review in biology","volume":"67 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2022-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Analysis of the Frequency of the Toll-like 2 Gene Polymorphism in Leprosy\",\"authors\":\"Marcos Jessé Abrahão Silva, Everaldina Cordeiro dos Santos, Y. C. Rodrigues, K. B. Batista Lima, Luana Nepomuceno Gondim Costa Lima\",\"doi\":\"10.9734/arrb/2022/v37i130472\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Polymorphisms in genes that are responsible for encoding cytokines and receptors involved in the immune response, such as Toll-like Receptor (TLR) 2 in leprosy, are of great interest for immunogenetic studies. This work aimed to analyze the possible association of single nucleotide polymorphism (SNP), synonymous, rs3804100 of the TLR2 gene with leprosy. The study was conducted in Bacteriology and Mycology section of Evandro Chagas Institute, Brazil between August 2020 and July 2021.The scope of the study consisted of 122 subjects from cities of Goianésia, Rondon, Curionópolis, Altamira, Parauapebas and Redenção of the State of Pará, Brazil. Genotyping was performed by conventional PCR and sequencing in the ABI 3130 Genetic Analyzer (Applied Biosystems®) using primer nucleotides designed by the Primer3Plus program from the genomic region “Homo sapiens toll like receptor 2 (TLR2) transcript variant X6, mRNA”, deposited in GenBank with reference XM_011532216.2. The analyzes were performed based on Fisher's exact test. It was managed in accordance with Helsinki Declaration and the Brazilian National Health Council and with approval of the ethics committee at Evandro Chagas Institute, under opinion number: 3.950.570. No associations between gender and leprosy were possible (P> 0.05). However, associations were observed between age groups, which were significant between those over 46 years old (P=0.004) and the 2nd dose of BCG as a more protective agent between the groups analyzed (P=0.004). For the subjects with the typed genotypes, 68 contacts had T/T genotype and only 4 T/C genotypes, while in multibacillary (MB) group only 1 T/C genotype was found and none in paucibacillary (PB) (P> 0.05). We conclude that there is no association between the TLR2 SNP rs3804100 and leprosy in the Pará population, which still indicates the need for new immunogenetic studies with other genes involved in the immune response and a greater number of polymorphisms.\",\"PeriodicalId\":8230,\"journal\":{\"name\":\"Annual research & review in biology\",\"volume\":\"67 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-01-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Annual research & review in biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.9734/arrb/2022/v37i130472\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Annual research & review in biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.9734/arrb/2022/v37i130472","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1
摘要
负责编码参与免疫反应的细胞因子和受体的基因多态性,如麻风病中的toll样受体(TLR) 2,对免疫遗传学研究具有很大的兴趣。这项工作旨在分析TLR2基因的单核苷酸多态性(SNP),同义,rs3804100与麻风病的可能关联。该研究于2020年8月至2021年7月在巴西Evandro Chagas研究所细菌学和真菌学部门进行。研究范围包括122名来自巴西帕尔帕州goiansamsia、Rondon、Curionópolis、Altamira、Parauapebas和reden o等城市的研究对象。在ABI 3130遗传分析仪(Applied Biosystems®)中,使用由Primer3Plus程序设计的引物核苷酸进行基因分型和测序,引物核苷酸来自基因组区域“Homo sapiens toll like receptor 2 (TLR2) transcript variant X6, mRNA”,保存在GenBank中,参考号为XM_011532216.2。分析是根据费雪的精确检验进行的。按照《赫尔辛基宣言》和巴西国家卫生委员会的规定进行管理,并得到了埃文德罗·查加斯研究所伦理委员会的批准,意见号:3.950.570。性别与麻风无相关性(P> 0.05)。然而,不同年龄组之间存在相关性,46岁以上年龄组之间存在显著相关性(P=0.004),第二剂卡介苗在各组之间具有更强的保护作用(P=0.004)。分型接触者T/T基因型68例,T/C基因型4例,多菌(MB)组T/C基因型1例,少菌(PB)组T/C基因型1例(P> 0.05)。我们的结论是,在par人群中,TLR2 SNP rs3804100与麻风病之间没有关联,这仍然表明需要对参与免疫反应的其他基因和更多的多态性进行新的免疫遗传学研究。
Analysis of the Frequency of the Toll-like 2 Gene Polymorphism in Leprosy
Polymorphisms in genes that are responsible for encoding cytokines and receptors involved in the immune response, such as Toll-like Receptor (TLR) 2 in leprosy, are of great interest for immunogenetic studies. This work aimed to analyze the possible association of single nucleotide polymorphism (SNP), synonymous, rs3804100 of the TLR2 gene with leprosy. The study was conducted in Bacteriology and Mycology section of Evandro Chagas Institute, Brazil between August 2020 and July 2021.The scope of the study consisted of 122 subjects from cities of Goianésia, Rondon, Curionópolis, Altamira, Parauapebas and Redenção of the State of Pará, Brazil. Genotyping was performed by conventional PCR and sequencing in the ABI 3130 Genetic Analyzer (Applied Biosystems®) using primer nucleotides designed by the Primer3Plus program from the genomic region “Homo sapiens toll like receptor 2 (TLR2) transcript variant X6, mRNA”, deposited in GenBank with reference XM_011532216.2. The analyzes were performed based on Fisher's exact test. It was managed in accordance with Helsinki Declaration and the Brazilian National Health Council and with approval of the ethics committee at Evandro Chagas Institute, under opinion number: 3.950.570. No associations between gender and leprosy were possible (P> 0.05). However, associations were observed between age groups, which were significant between those over 46 years old (P=0.004) and the 2nd dose of BCG as a more protective agent between the groups analyzed (P=0.004). For the subjects with the typed genotypes, 68 contacts had T/T genotype and only 4 T/C genotypes, while in multibacillary (MB) group only 1 T/C genotype was found and none in paucibacillary (PB) (P> 0.05). We conclude that there is no association between the TLR2 SNP rs3804100 and leprosy in the Pará population, which still indicates the need for new immunogenetic studies with other genes involved in the immune response and a greater number of polymorphisms.