一些非洲慈鲷的微卫星跨种扩增。

Etienne Bezault, Xavier Rognon, Karim Gharbi, Jean-Francois Baroiller, Bernard Chevassus
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引用次数: 16

摘要

将尼罗罗非鱼(Oreochromis niloticus)的基因组资源转移到其他罗非鱼(sensu lato)和非洲丽鱼身上,将从遗传学、生态学、进化、水产养殖和保护的角度为研究这一令人惊叹的群体提供新的可能性。我们对32个O. niloticus微卫星标记进行了跨种扩增,测试了来自5个不同非洲鱼族的15个物种:Oreochromines (Oreochromis, Sarotherodon)、Boreotilapiines(罗非鱼)、Chromidotilapines、hemichroines和haplochroines。29个标记(91%)成功扩增,每个物种的多态性位点(P(95))频率约为70%。每个位点和每个物种的平均等位基因数为3.2个,但不同的物种等位基因数从罗非鱼种的3.7个到非罗非鱼种的1.6个不等。本研究检测的微卫星标记具有高水平的跨种扩增和多态性,为罗非鱼和其他非洲鲷的分子遗传学研究提供了强有力的工具。
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Microsatellites Cross-Species Amplification across Some African Cichlids.

The transfer of the genomic resources developed in the Nile tilapia, Oreochromis niloticus, to other Tilapiines sensu lato and African cichlid would provide new possibilities to study this amazing group from genetics, ecology, evolution, aquaculture, and conservation point of view. We tested the cross-species amplification of 32 O. niloticus microsatellite markers in a panel of 15 species from 5 different African cichlid tribes: Oreochromines (Oreochromis, Sarotherodon), Boreotilapiines (Tilapia), Chromidotilapines, Hemichromines, and Haplochromines. Amplification was successfully observed for 29 markers (91%), with a frequency of polymorphic (P(95)) loci per species around 70%. The mean number of alleles per locus and species was 3.2 but varied from 3.7 within Oreochromis species to 1.6 within the nontilapia species. The high level of cross-species amplification and polymorphism of the microsatellite markers tested in this study provides powerful tools for a wide range of molecular genetic studies within tilapia species as well as for other African cichlids.

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