胶质母细胞瘤缺氧相关 lncRNA 标志及其泛癌症景观的预后分析

IF 0.9 4区 医学 Q4 CLINICAL NEUROLOGY Journal of neurological surgery. Part A, Central European neurosurgery Pub Date : 2024-07-01 Epub Date: 2023-04-06 DOI:10.1055/a-2070-3715
Yue Qin, Xiaonan Zhang, Yulei Chen, Wan Zhang, Shasha Du, Chen Ren
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引用次数: 0

摘要

背景:缺氧是胶质母细胞瘤(GBM)的一个重要临床特征,它调控着多种肿瘤过程,与放疗密不可分。越来越多的证据表明,长非编码 RNA(lncRNA)与 GBM 患者的生存结果密切相关,并能调节缺氧诱导的肿瘤过程。因此,本研究旨在建立缺氧相关lncRNAs(HALs)预后模型,以预测GBM患者的生存结果:从癌症基因组图谱数据库中提取 GBM 样本中的 LncRNAs。缺氧相关基因从分子特征数据库中下载。对GBM样本中差异表达的lncRNA和缺氧相关基因进行共表达分析,以确定HALs。通过单变量Cox回归分析,筛选出6个最佳lncRNA用于建立HALs模型:结果:该预测模型对GBM患者的预后具有良好的预测效果。结果:该预测模型对 GBM 患者的预后有很好的预测作用,同时,6 个 lncRNA 中的 LINC00957 被选中并进行了泛癌症景观分析:综上所述,我们的研究结果表明,HALs评估模型可用于预测GBM患者的预后。此外,模型中的 LINC00957 可能是研究癌症发展机制和设计个体化治疗策略的有用靶点。
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Prognostic Analysis of a Hypoxia-Associated lncRNA Signature in Glioblastoma and its Pan-Cancer Landscape.

Background:  Hypoxia is an important clinical feature of glioblastoma (GBM), which regulates a variety of tumor processes and is inseparable from radiotherapy. Accumulating evidence suggests that long noncoding RNAs (lncRNAs) are strongly associated with survival outcomes in GBM patients and modulate hypoxia-induced tumor processes. Therefore, the aim of this study was to establish a hypoxia-associated lncRNAs (HALs) prognostic model to predict survival outcomes in GBM patients.

Methods:  LncRNAs in GBM samples were extracted from The Cancer Genome Atlas database. Hypoxia-related genes were downloaded from the Molecular Signature Database. Co-expression analysis of differentially expressed lncRNAs and hypoxia-related genes in GBM samples was performed to determine HALs. Six optimal lncRNAs were selected for building HALs models by univariate Cox regression analysis.

Results:  The prediction model has a good predictive effect on the prognosis of GBM patients. Meanwhile, LINC00957 among the six lncRNAs was selected and subjected to pan-cancer landscape analysis.

Conclusion:  Taken together, our findings suggest that the HALs assessment model can be used to predict the prognosis of GBM patients. In addition, LINC00957 included in the model may be a useful target to study the mechanism of cancer development and design individualized treatment strategies.

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来源期刊
CiteScore
2.30
自引率
0.00%
发文量
90
期刊介绍: The Journal of Neurological Surgery Part A: Central European Neurosurgery (JNLS A) is a major publication from the world''s leading publisher in neurosurgery. JNLS A currently serves as the official organ of several national neurosurgery societies. JNLS A is a peer-reviewed journal publishing original research, review articles, and technical notes covering all aspects of neurological surgery. The focus of JNLS A includes microsurgery as well as the latest minimally invasive techniques, such as stereotactic-guided surgery, endoscopy, and endovascular procedures. JNLS A covers purely neurosurgical topics.
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