POPcorn:POPcorn: 提供访问分布式和多样化玉米项目数据的在线资源。

International journal of plant genomics Pub Date : 2011-01-01 Epub Date: 2011-12-27 DOI:10.1155/2011/923035
Ethalinda K S Cannon, Scott M Birkett, Bremen L Braun, Sateesh Kodavali, Douglas M Jennewein, Alper Yilmaz, Valentin Antonescu, Corina Antonescu, Lisa C Harper, Jack M Gardiner, Mary L Schaeffer, Darwin A Campbell, Carson M Andorf, Destri Andorf, Damon Lisch, Karen E Koch, Donald R McCarty, John Quackenbush, Erich Grotewold, Carol M Lushbough, Taner Z Sen, Carolyn J Lawrence
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摘要

本文介绍的在线资源 POPcorn(玉米项目门户网站)旨在提高植物生物学家获取玉米基因和基因组资源的能力。目前,许多在线地点很难找到,有些最好是独立搜索,而且单个项目网站往往会随着时间的推移而退化,有时甚至会完全消失。POPcorn 网站提供:(1) 一个集中的、可通过网络访问的资源,用于搜索和浏览对正在进行的玉米基因组学项目的描述;(2) 一个单独的工具,使用网络服务和最低限度的数据仓库在不同的站外项目的在线资源中搜索序列匹配;(3) 一套工具,使研究人员能够将他们的数据迁移到玉米基因和基因组信息的长期模式生物数据库:MaizeGDB。本文举例说明了 POPcorn 的实用性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data.

The purpose of the online resource presented here, POPcorn (Project Portal for corn), is to enhance accessibility of maize genetic and genomic resources for plant biologists. Currently, many online locations are difficult to find, some are best searched independently, and individual project websites often degrade over time-sometimes disappearing entirely. The POPcorn site makes available (1) a centralized, web-accessible resource to search and browse descriptions of ongoing maize genomics projects, (2) a single, stand-alone tool that uses web Services and minimal data warehousing to search for sequence matches in online resources of diverse offsite projects, and (3) a set of tools that enables researchers to migrate their data to the long-term model organism database for maize genetic and genomic information: MaizeGDB. Examples demonstrating POPcorn's utility are provided herein.

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