Computational assessment of lipid facilitated membrane permeation of vancomycin using force-probe molecular dynamic simulation.

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular Structure & Dynamics Pub Date : 2024-10-01 Epub Date: 2023-08-22 DOI:10.1080/07391102.2023.2248513
Mohabbat Ansari, Sajad Moradi, Simzar Hosseinzadeh, Mohsen Shahlaei
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Abstract

In this study the efficacy of different edible lipids for drug permeation enhancement of vancomycin through biological membrane was investigated using molecular dynamic simulation. In this regard, at first the ability of the lipids for complex formation with the drug was evaluated for number of most common edible lipids including tripalmitin (TPA), trimyristin (TMY), labrafil (LAB), glycerol monostearate (GMS), glycerol monooleate (GMO), Distearoylphosphorylethanolamine (DSPE), dipalmitoylphosphatidylethanolamine (DPPE), Dipalmitoylphosphatidylcholine (DPPC), cholesterol (CL), stearic acid (SA), palmitic acid (PA) and oleic acid (OA). Then the complexes were pulled thorough a bilayer membrane while the changes in force were probed. The results showed that besides the SA, PA and OA the other examined lipids were able to perform a perfect molecular complex with the drug. Also the results of pulling simulation revealed that the least of force was needed for drug transmittance through the membrane when it was covered by LAB, TMY and DSPE. These results indicated that these lipids can be the excellent materials of choice as permeation enhancer for preparing a proper oral formulation of vancomycin.Communicated by Ramaswamy H. Sarma.

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利用测力探针分子动力学模拟对万古霉素的脂质促进膜渗透进行计算评估。
本研究利用分子动力学模拟法研究了不同食用脂质对提高万古霉素通过生物膜的药物渗透性的功效。甘油单油酸酯 (GMO)、二硬脂酰磷酰乙醇胺 (DSPE)、二棕榈酰磷脂酰乙醇胺 (DPPE)、二棕榈酰磷脂酰胆碱 (DPPC)、胆固醇 (CL)、硬脂酸 (SA)、棕榈酸 (PA) 和油酸 (OA)。然后将复合物拉过双层膜,同时探测力的变化。结果表明,除了 SA、PA 和 OA 外,其他被研究的脂质也能与药物形成完美的分子复合物。拉力模拟结果还显示,当膜上覆盖有 LAB、TMY 和 DSPE 时,药物透过膜所需的力最小。这些结果表明,这些脂质可以作为制备万古霉素口服制剂的最佳渗透增强剂材料。
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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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