Lynda M. Brady , Eric Rombokas , Yak-Nam Wang , Jane B. Shofer , William R. Ledoux
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引用次数: 0
Abstract
Background
Plantar ulceration is a serious complication of diabetes. However, the mechanism of injury initiating ulceration remains unclear. The unique structure of the plantar soft tissue includes superficial and deep layers of adipocytes contained in septal chambers, however, the size of these chambers has not been quantified in diabetic or non-diabetic tissue. Computer-aided methods can be leveraged to guide microstructural measurements and differences with disease status.
Methods
Adipose chambers in whole slide images of diabetic and non-diabetic plantar soft tissue were segmented with a pre-trained U-Net and area, perimeter, and minimum and maximum diameter of adipose chambers were measured. Whole slide images were classified as diabetic or non-diabetic using the Axial-DeepLab network, and the attention layer was overlaid on the input image for interpretation.
Results
Non-diabetic deep chambers were 90 %, 41 %, 34 %, and 39 % larger in area (26,954 ± 2428 µm2 vs 14,157 ± 1153 µm2), maximum (277 ± 13 µm vs 197 ± 8 µm) and minimum (140 ± 6 µm vs 104 ± 4 µm) diameter, and perimeter (405 ± 19 µm vs 291 ± 12 µm), respectively, than the superficial (p < 0.001). However, there was no significant difference in these parameters in diabetic specimens (area 18,695 ± 2576 µm2 vs 16627 ± 130 µm2, maximum diameter 221 ± 16 µm vs 210 ± 14 µm, minimum diameter 121 ± 8 µm vs 114 ± 7 µm, perimeter 341 ± 24 µm vs 320 ± 21 µm). Between diabetic and non-diabetic chambers, only the maximum diameter of the deep chambers differed (221 ± 16 µm vs 277 ± 13 µm). The attention network achieved 82 % accuracy on validation, but the attention resolution was too coarse to identify meaningful additional measurements.
Conclusions
Adipose chamber size differences may provide a basis for plantar soft tissue mechanical changes with diabetes. Attention networks are promising tools for classification, but additional care is required when designing networks for identifying novel features.
Data Availability
All images, analysis code, data, and/or other resources required to replicate this work are available from the corresponding author upon reasonable request.
背景:足底溃疡是糖尿病的一种严重并发症。然而,损伤引发溃疡的机制尚不清楚。足底软组织的独特结构包括隔室中包含的浅层和深层脂肪细胞,然而,糖尿病或非糖尿病组织中这些隔室的大小尚未量化。可以利用计算机辅助方法来指导微观结构测量以及与疾病状态的差异。方法:用预先训练的U-Net对糖尿病和非糖尿病足底软组织的全玻片图像中的脂肪室进行分割,并测量脂肪室的面积、周长、最小和最大直径。使用Axial DeepLab网络将整张幻灯片图像分类为糖尿病或非糖尿病,并将注意力层覆盖在输入图像上进行解释。结果:非糖尿病深腔的面积(26954±2428µm2 vs 14157±1153µm2)、最大直径(277±13µm vs 197±8µm)和最小直径(140±6µm vs 104±4µm)以及周长(405±19µm vs 291±12µm)分别大90%、41%、34%和39%,比浅表面积大(p 2 vs 16627±130µm2,最大直径221±16µm vs 210±14µm,最小直径121±8µm vs 114±7µm,周长341±24µm vs 320±21µm)。在糖尿病和非糖尿病腔室之间,只有深腔室的最大直径不同(221±16µm与277±13µm)。注意力网络在验证时达到了82%的准确率,但注意力分辨率太粗糙,无法识别有意义的额外测量。结论:脂肪室大小差异可能为糖尿病患者足底软组织力学变化提供依据。注意力网络是很有前途的分类工具,但在设计识别新特征的网络时需要格外小心。数据可用性:复制本作品所需的所有图像、分析代码、数据和/或其他资源可根据合理要求从通讯作者处获得。
期刊介绍:
The Foot is an international peer-reviewed journal covering all aspects of scientific approaches and medical and surgical treatment of the foot. The Foot aims to provide a multidisciplinary platform for all specialties involved in treating disorders of the foot. At present it is the only journal which provides this inter-disciplinary opportunity. Primary research papers cover a wide range of disorders of the foot and their treatment, including diabetes, vascular disease, neurological, dermatological and infectious conditions, sports injuries, biomechanics, bioengineering, orthoses and prostheses.