An outlook of docking analysis and structure-activity relationship of pyrimidine-based analogues as EGFR inhibitors against non-small cell lung cancer (NSCLC).

IF 2.7 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular Structure & Dynamics Pub Date : 2024-11-01 Epub Date: 2023-08-29 DOI:10.1080/07391102.2023.2252082
Rohit Pal, Ghanshyam Teli, Sindhuja Sengupta, Lalmohan Maji, Gurubasavaraja Swamy Purawarga Matada
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Abstract

Almost 80% of lung cancer diagnoses each year correspond to non-small cell lung cancer (NSCLC). The percentage of NSCLC with EGFR overexpression ranges from 40% to 89%, with squamous tumors showing the greatest rates (89%) and adenocarcinomas showing the lowest rates (41%). Therefore, in NSCLC therapy, blocking the EGFR-driven pathway by inhibiting the intracellular tyrosine kinase domain of EGFR has exhibited significant improvement. In this view, several small molecules particularly pyrimidine/fused pyrimidine scaffolds were intended for molecular hybridization to develop EGFR-TK inhibitors. However, the associated limitation such as resistance and genetic mutation along with adverse effects, constrained the long-term treatment and effectiveness of such medication. Therefore, in recent years, pyrimidine derivatives were uncovered as potential EGFR TKIs. The present review summarised the research progress of EGFR TKIs to dazed structure-activity relationship, biological evaluation, and comparative docking studies of pyrimidine compounds. We have added the comparative docking analysis followed by the molecular simulation study against the four different PDBs of EGFR to strengthen the already existing research. Docking analysis unfolded that compound 14 resulted as noticeable with all different PDB and managed to interact with some of the crucial amino acid residues. From a future perspective, researchers must develop a more selective inhibitor, that can selectively target the mutation. Our review will support medicinal chemists in the direction of the development of novel pyrimidine-based EGFR TKIs.Communicated by Ramaswamy H. Sarma.

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基于嘧啶的EGFR抑制剂对接分析及构效关系研究进展
每年几乎80%的肺癌诊断为非小细胞肺癌(NSCLC)。EGFR过表达的非小细胞肺癌比例从40%到89%不等,鳞状肿瘤的比例最高(89%),腺癌的比例最低(41%)。因此,在NSCLC治疗中,通过抑制EGFR细胞内酪氨酸激酶结构域来阻断EGFR驱动通路已显示出显著的改善。在这种观点下,一些小分子特别是嘧啶/融合嘧啶支架被用于分子杂交以开发EGFR-TK抑制剂。然而,相关的限制,如耐药性和基因突变以及不良反应,限制了这种药物的长期治疗和有效性。因此,近年来,嘧啶衍生物被发现是潜在的EGFR TKIs。本文综述了EGFR TKIs在与嘧啶类化合物的构效关系、生物学评价和比较对接等方面的研究进展。我们增加了EGFR四种不同PDBs的比较对接分析和分子模拟研究,以加强已有的研究。对接分析显示,化合物14与所有不同的PDB都有显著的相互作用,并成功地与一些关键氨基酸残基相互作用。从未来的角度来看,研究人员必须开发一种更具选择性的抑制剂,可以选择性地靶向突变。我们的综述将支持药物化学家朝着开发新型基于嘧啶的EGFR TKIs的方向发展。由Ramaswamy H. Sarma传达。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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