Density forecasting of conjunctivitis burden using high-dimensional environmental time series data

IF 3 3区 医学 Q2 INFECTIOUS DISEASES Epidemics Pub Date : 2023-09-01 DOI:10.1016/j.epidem.2023.100694
Jue Tao Lim , Esther Li Wen Choo , A. Janhavi , Kelvin Bryan Tan , John Abisheganaden , Borame Dickens
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Abstract

As one of the most common eye conditions being presented at clinics, acute conjunctivitis puts substantial strain on primary health resources. To reduce this public health burden, it is important to forecast and provide forward guidance to policymakers by estimating conjunctivitis trends, taking into account factors which influence transmission. Using a high-dimensional set of ambient air pollution and meteorological data, this study describes new approaches to point and probabilistic forecasting of conjunctivitis burden which can be readily translated to other infectious diseases. Over the period of 2012 – 2022, we show that simple models without environmental data provided better point forecasts but the more complex models which optimized predictive accuracy and combined multiple predictors demonstrated superior density forecast performance. These results were shown to be consistent over periods with and without structural breaks in transmission. Furthermore, ecological analysis using post-selection inference showed that increases in SO2, O3 surface concentration and total precipitation were associated to increased conjunctivitis attendance. The methods proposed can provide rich and informative forward guidance for outbreak preparedness and help guide healthcare resource planning in both stable periods of transmission and periods where structural breaks in data occur.

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使用高维环境时间序列数据的结膜炎负荷密度预测。
急性结膜炎是临床上最常见的眼部疾病之一,给初级卫生资源带来了巨大压力。为了减轻这种公共卫生负担,重要的是要预测结膜炎的趋势,并为决策者提供前瞻性指导,同时考虑到影响传播的因素。利用一组高维的环境空气污染和气象数据,本研究描述了结膜炎负担的点和概率预测的新方法,这些方法可以很容易地转化为其他传染病。在2012-2012年期间,我们发现,没有环境数据的简单模型提供了更好的点预测,但优化预测精度并结合多个预测因子的更复杂模型显示出优越的密度预测性能。这些结果在有和没有传播结构中断的时期内是一致的。此外,使用后选择推理的生态分析表明,SO2、O3表面浓度和总降水量的增加与结膜炎发病率的增加有关。所提出的方法可以为疫情准备提供丰富而翔实的前瞻性指导,并有助于指导稳定传播期和数据出现结构性中断期的医疗资源规划。
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来源期刊
Epidemics
Epidemics INFECTIOUS DISEASES-
CiteScore
6.00
自引率
7.90%
发文量
92
审稿时长
140 days
期刊介绍: Epidemics publishes papers on infectious disease dynamics in the broadest sense. Its scope covers both within-host dynamics of infectious agents and dynamics at the population level, particularly the interaction between the two. Areas of emphasis include: spread, transmission, persistence, implications and population dynamics of infectious diseases; population and public health as well as policy aspects of control and prevention; dynamics at the individual level; interaction with the environment, ecology and evolution of infectious diseases, as well as population genetics of infectious agents.
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