Genetic structure of the population of wild-growing vines of the Utrish Nature Reserve.

IF 0.9 Q3 AGRICULTURE, MULTIDISCIPLINARY Vavilovskii Zhurnal Genetiki i Selektsii Pub Date : 2023-07-01 DOI:10.18699/VJGB-23-38
E T Ilnitskaya, M V Makarkina, I V Gorbunov, I V Stepanov, T D Kozina, E A Kozhevnikov, V K Kotlyar
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Abstract

Grapes are one of the most common agricultural crops in the world. Currently, the analysis of genotypes directly at the DNA level is considered to be the most accurate method for studying the plant gene pool. The study of wild vines and ancient varieties in various regions of viticulture is an important direction of research in this field. The purpose of this work was to study the population of wild grapes growing on the territory of the Utrish Nature Reserve on the Black Sea coast of Krasnodar Region. The territory of the reserve is of interest as it is a site of ancient settlements, and the environmental conditions are suitable for the growth of wild grapes. During the survey of the territory, 24 samples of wild grapes were found, which were described according to the main morphological characteristics and analyzed by the molecular genetic method. The found vines were genotyped using 15 DNA markers, including nine commonly used for DNA fingerprinting (VVS2, VVMD5, VVMD7, VVMD25, VVMD27, VVMD28, VVMD32, VrZAG62, VrZAG79) and VVIb23, which allows determining hermaphrodite and dioecious vines. Statistical processing of microsatellite loci polymorphism data was carried out using the GenAlEx 6.5 program. The genetic relationships of the studied vines were evaluated using the PAST 2.17c program. The samples were found to be morphologically and genetically polymorphic. The number of alleles identified in the sample varied from 5 to 18 and averaged 8 alleles per locus. Statistical processing of DNA analysis data made it possible to identify two genetically different populations among the wild discovered vines. An assessment of genetic similarity of the found vines with some local varieties of geographically close viticulture regions, rootstocks and representatives of Vitis sylvestris from other territories was made. One of the populations found in the Utrish Nature Reserve is close to a number of V. sylvestris genotypes, the DNA profiles of which are presented in the Vitis International Variety Catalogue.

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乌特里什自然保护区野生葡萄种群的遗传结构。
葡萄是世界上最常见的农作物之一。目前,直接在DNA水平上进行基因型分析被认为是研究植物基因库最准确的方法。对葡萄栽培地区的野生葡萄和古品种进行研究是该领域的一个重要研究方向。本研究的目的是研究克拉斯诺达尔地区黑海沿岸乌特里什自然保护区的野生葡萄种群。保护区的领土很有趣,因为它是一个古老的定居点,环境条件适合野生葡萄的生长。在调查过程中,共发现野生葡萄样品24份,根据主要形态特征进行了描述,并采用分子遗传学方法进行了分析。利用15种DNA标记进行基因分型,包括9种DNA指纹图谱常用的标记(VVS2、VVMD5、VVMD7、VVMD25、VVMD27、VVMD28、VVMD32、VrZAG62、VrZAG79)和VVIb23,可以确定雌雄同体和雌雌异株葡萄。采用GenAlEx 6.5程序对微卫星基因座多态性数据进行统计处理。利用PAST 2.17c程序对所研究的葡萄品种进行亲缘关系评价。这些样本在形态和基因上都是多态的。在样本中鉴定到的等位基因数量从5个到18个不等,平均每个位点有8个等位基因。对DNA分析数据进行统计处理,可以在发现的野生藤蔓中识别出两个基因不同的种群。对发现的葡萄品种与地理上相近的葡萄栽培地区的一些地方品种、砧木和来自其他地区的葡萄品种的遗传相似性进行了评估。在英国自然保护区发现的一个种群与许多V. sylvestris基因型接近,其DNA谱已在Vitis国际品种目录中提出。
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来源期刊
Vavilovskii Zhurnal Genetiki i Selektsii
Vavilovskii Zhurnal Genetiki i Selektsii AGRICULTURE, MULTIDISCIPLINARY-
CiteScore
1.90
自引率
0.00%
发文量
119
审稿时长
8 weeks
期刊介绍: The "Vavilov Journal of genetics and breeding" publishes original research and review articles in all key areas of modern plant, animal and human genetics, genomics, bioinformatics and biotechnology. One of the main objectives of the journal is integration of theoretical and applied research in the field of genetics. Special attention is paid to the most topical areas in modern genetics dealing with global concerns such as food security and human health.
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