Simulation of biochemical dynamics of [Formula: see text] and [Formula: see text] in fibroblast cell.

IF 2.9 4区 生物学 Q2 BIOPHYSICS Journal of Bioenergetics and Biomembranes Pub Date : 2023-08-01 Epub Date: 2023-07-26 DOI:10.1007/s10863-023-09976-5
Ankit Kothiya, Neeru Adlakha
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引用次数: 2

Abstract

Calcium dynamics is not only responsible for maintaining the framework and functions of the cell but also plays a role in the dynamics of other biochemical systems in the cell. Phospholipase C-[Formula: see text] l ([Formula: see text]) has a crucial role in the function of fibroblast cells. Experiments have shown that [Formula: see text] and [Formula: see text] have interdependent dynamics in fibroblast cells. However, no reaction-diffusion model exists for the two-way feedback system dynamics of [Formula: see text] and [Formula: see text] in fibroblasts till date. The computational model is designed to investigate the impact of variations in several processes, such as the [Formula: see text] pump, buffer process, source inflow, etc., on the system dynamics of [Formula: see text] and [Formula: see text] in fibroblast cells. The computational findings are obtained using finite element techniques, and the consequences of dysregulation in various processes on the spatiotemporal calcium and [Formula: see text] dynamics in fibroblasts are investigated. The results lead to the conclusion that the effects of buffer, source influx, diffusion, and [Formula: see text] pump can cause fluctuations in the dynamics of [Formula: see text] and [Formula: see text] in fibroblasts. Disruptions in these constitutive processes can result in changes in the dynamics of calcium and [Formula: see text]. Thus, the current model provides new/novel information regarding the precise dysregulatory constitutive systems that regulate calcium and [Formula: see text] kinetics, such as source inflow, diffusion, [Formula: see text], and buffer, can be responsible for excessive calcium and [Formula: see text] concentrations leading to fibrotic illnesses such as cancer and fibrosis.

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[公式:见正文]和[公式:参见正文]在成纤维细胞中的生化动力学模拟。
钙动力学不仅负责维持细胞的结构和功能,而且在细胞中其他生化系统的动力学中发挥作用。磷脂酶C-[式:见正文]l([式:参见正文])在成纤维细胞的功能中起着至关重要的作用。实验表明,[公式:见正文]和[公式:看正文]在成纤维细胞中具有相互依赖的动力学。然而,迄今为止,成纤维细胞中[公式:见正文]和[公式:参见正文]的双向反馈系统动力学还不存在反应-扩散模型。该计算模型旨在研究几个过程中的变化对成纤维细胞中[公式:见正文]和[公式:见图正文]的系统动力学的影响,如[公式:参见正文]泵、缓冲过程、源流入等。使用有限元技术获得了计算结果,并研究了各种过程中失调对成纤维细胞时空钙和[公式:见正文]动力学的影响。结果得出的结论是,缓冲液、源流入、扩散和[公式:见正文]泵的作用会导致成纤维细胞中[公式:参见正文]和[公式:见正文]的动力学波动。这些组成过程的破坏可能导致钙和[公式:见正文]的动力学变化。因此,当前的模型提供了关于精确的失调组成系统的新的/新颖的信息,这些失调组成系统调节钙和[公式:见正文]动力学,如源流入、扩散、[公式:参见正文]和缓冲液,可能导致过多的钙和[配方:见正文】浓度导致纤维化疾病,如癌症和纤维化。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
6.00
自引率
0.00%
发文量
22
审稿时长
6-12 weeks
期刊介绍: The Journal of Bioenergetics and Biomembranes is an international journal devoted to the publication of original research that contributes to fundamental knowledge in the areas of bioenergetics, biomembranes, and transport, including oxidative phosphorylation, photosynthesis, muscle contraction, as well as cellular and systemic metabolism. The timely research in this international journal benefits biophysicists, membrane biologists, cell biologists, biochemists, molecular biologists, physiologists, endocrinologists, and bio-organic chemists.
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